Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RN7SKP226-201ENST00000364912 300 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 MIR181A1-201ENST00000385026 110 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 VN1R33P-201ENST00000411800 887 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 IFNA12P-201ENST00000413147 571 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 MTND2P23-201ENST00000422990 651 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC008850.1-201ENST00000427546 362 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SNX18P9-201ENST00000440580 835 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RPS19P6-201ENST00000441327 433 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 MTATP6P30-201ENST00000443540 664 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 DPPA3P1-201ENST00000448050 469 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RPL7L1P3-201ENST00000455249 689 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RPL7P32-201ENST00000457119 744 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RN7SL647P-201ENST00000485429 300 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RPL7AP26-201ENST00000488538 813 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RPL9P6-201ENST00000492764 598 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 RN7SL124P-201ENST00000498656 285 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AK4P6-201ENST00000505168 528 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SUMO2P7-201ENST00000511179 285 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 IGLVIV-59-201ENST00000520218 250 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC006504.3-201ENST00000586818 523 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 PRR13P3-201ENST00000603578 376 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC005034.2-201ENST00000604464 414 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL049634.3-201ENST00000604968 457 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL109918.2-201ENST00000605188 279 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC092354.1-201ENST00000606057 376 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 Y_RNA.812-201ENST00000610788 101 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 Y_RNA.784-201ENST00000613803 101 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 Y_RNA.787-201ENST00000616522 101 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC010205.1-201ENST00000616668 449 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 Y_RNA.780-201ENST00000617336 101 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 Y_RNA.801-201ENST00000619005 101 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 ZNF90P1-201ENST00000480493 1951 ntBASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.79□□□□□ -1.16
FOXR1Q6PIV2 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 GTF2IP1-202ENST00000614592 2047 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 OR10J6P-201ENST00000289731 930 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 IL6STP1-201ENST00000346911 1020 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RNA5SP463-201ENST00000363030 120 ntBASIC7.78□□□□□ -1.16
FOXR1Q6PIV2 RNA5SP483-201ENST00000363431 118 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms