Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC025470.1-201ENST00000510053 2032 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 RN7SKP162-201ENST00000363605 345 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 RPL35AP24-201ENST00000413846 330 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC015977.1-201ENST00000418887 292 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AK4P4-201ENST00000419465 646 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC007568.1-201ENST00000422912 471 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 Z84478.1-201ENST00000438230 1219 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 RPL23AP40-201ENST00000487630 390 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC109481.1-201ENST00000509173 282 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 GAPDHP71-201ENST00000511530 1003 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 SCARNA6.1-201ENST00000516989 238 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 IGKV2-18-201ENST00000522607 343 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC007225.2-201ENST00000562529 256 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC079395.2-201ENST00000610982 737 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 AC027279.4-201ENST00000624371 2072 ntBASIC6.85□□□□□ -1.31
SHROOM1Q2M3G4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AC235565.1-201ENST00000456962 1325 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 RN7SKP151-201ENST00000410230 316 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 DPPA2P3-201ENST00000411853 655 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 RNU6-615P-201ENST00000516065 106 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AC013244.1-201ENST00000604279 193 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AC007204.2-201ENST00000615022 616 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 AL035661.1-201ENST00000620459 1144 ntBASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SHROOM1Q2M3G4 IMMTP1-201ENST00000435590 2219 ntBASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.84□□□□□ -1.32
SHROOM1Q2M3G4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LCOR-201ENST00000286067 4542 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LINC02019-201ENST00000608605 2060 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 OR9K1P-201ENST00000326513 941 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LRRC37A14P-201ENST00000452297 462 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 AC004129.2-201ENST00000457229 287 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 RPL35AP19-201ENST00000469425 329 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 PFN1P6-201ENST00000476786 399 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 AC022215.1-201ENST00000481770 362 ntBASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.83□□□□□ -1.32
SHROOM1Q2M3G4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms