Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 AL138847.1-201ENST00000258651 546 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 RNA5SP301-201ENST00000362537 121 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 RNA5SP260-201ENST00000363849 111 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 RNA5SP238-201ENST00000365464 120 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDH1Q08174 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDH1Q08174 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 GEMIN2P2-201ENST00000418195 715 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AL390840.1-201ENST00000420303 988 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 FO393419.3-201ENST00000428741 282 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 PRPS1P2-201ENST00000430496 937 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 USP9YP31-201ENST00000431405 881 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 VN1R54P-201ENST00000435210 1049 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 USP9YP22-201ENST00000438971 294 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC002542.1-201ENST00000440683 193 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 ARMC8P1-201ENST00000443069 1289 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AL358876.1-201ENST00000453364 1075 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC040975.1-201ENST00000472104 316 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 MYL12BP2-201ENST00000503948 512 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 PRDX4P1-201ENST00000507189 574 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 ADI1P3-201ENST00000549509 470 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AL121839.1-201ENST00000556233 1185 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC084757.1-201ENST00000559987 490 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 ATP5F1P7-201ENST00000567330 760 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AC097381.3-201ENST00000608962 462 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AC110769.3-201ENST00000624567 1173 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDH1Q08174 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDH1Q08174 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PCDH1Q08174 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.09□□□□□ -1.28
PCDH1Q08174 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.09□□□□□ -1.28
PCDH1Q08174 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC073342.2-201ENST00000595842 1800 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC104581.5-201ENST00000624171 7141 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 OR4G2P-201ENST00000328113 903 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 RN7SKP211-201ENST00000363328 315 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 RNU6-1042P-201ENST00000384204 107 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDH1Q08174 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH1Q08174 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 NRBF2P2-201ENST00000413087 861 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms