Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 DHX40P1-201ENST00000588725 1412 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 AC079741.1-201ENST00000321498 212 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PRKDCP78527 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 MIR541-201ENST00000401360 84 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 AC011005.3-201ENST00000491624 395 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 AC125494.2-201ENST00000602431 657 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.94□□□□□ -1.78
PRKDCP78527 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 AP002364.1-201ENST00000623330 3386 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 NXF4-202ENST00000416098 1465 ntBASIC3.94□□□□□ -1.78
PRKDCP78527 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRKDCP78527 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC3.94□□□□□ -1.78
PRKDCP78527 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
PRKDCP78527 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC069366.1-201ENST00000583159 838 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AC015818.6-201ENST00000584274 634 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AC079414.3-201ENST00000612986 1090 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC3.93□□□□□ -1.78
PRKDCP78527 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 AC119751.6-201ENST00000416712 186 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKDCP78527 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 RPL12P17-201ENST00000432393 498 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC112498.1-201ENST00000444401 332 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKDCP78527 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC083829.1-201ENST00000503756 657 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AC105384.2-201ENST00000508433 640 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AC138701.1-201ENST00000524329 714 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKDCP78527 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC011369.2-201ENST00000624423 1567 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC005225.5-201ENST00000623547 2225 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 ST13P16-201ENST00000401760 781 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRKDCP78527 RNU4-25P-201ENST00000410569 230 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AL592293.2-201ENST00000422292 996 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.93□□□□□ -1.78
PRKDCP78527 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC3.93□□□□□ -1.78
PRKDCP78527 AC005377.1-201ENST00000605126 456 ntBASIC3.93□□□□□ -1.78
PRKDCP78527 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms