Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC015849.2-201ENST00000605738 409 ntBASIC5.85□□□□□ -1.47
RAE1P78406 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 MIR8084-201ENST00000614105 89 ntBASIC5.85□□□□□ -1.47
RAE1P78406 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RAE1P78406 AP000770.2-201ENST00000623694 100 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AP003476.1-201ENST00000623984 516 ntBASIC5.85□□□□□ -1.47
RAE1P78406 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RAE1P78406 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.85□□□□□ -1.47
RAE1P78406 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
RAE1P78406 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.85□□□□□ -1.47
RAE1P78406 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 AKAP17BP-201ENST00000431706 2719 ntBASIC5.84□□□□□ -1.47
RAE1P78406 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RAE1P78406 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 RPL23AP17-201ENST00000401064 499 ntBASIC5.84□□□□□ -1.47
RAE1P78406 Z86062.1-201ENST00000406773 777 ntBASIC5.84□□□□□ -1.47
RAE1P78406 RNA5SP198-201ENST00000410376 127 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.84□□□□□ -1.47
RAE1P78406 AL024507.1-201ENST00000412741 274 ntBASIC5.84□□□□□ -1.47
RAE1P78406 RPS26P38-201ENST00000414476 348 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.84□□□□□ -1.47
RAE1P78406 ARL2BPP3-201ENST00000421226 480 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.84□□□□□ -1.47
RAE1P78406 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 GAPDHP75-201ENST00000433910 943 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AL731534.1-201ENST00000434711 269 ntBASIC5.84□□□□□ -1.47
RAE1P78406 Z80107.1-201ENST00000436830 412 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC013403.1-201ENST00000436954 263 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AL645931.1-201ENST00000439737 410 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 OFD1P3Y-201ENST00000453312 783 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 RPS7P10-201ENST00000464254 603 ntBASIC5.84□□□□□ -1.47
RAE1P78406 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.84□□□□□ -1.47
RAE1P78406 RN7SL205P-201ENST00000490174 284 ntBASIC5.84□□□□□ -1.47
RAE1P78406 SNRPCP11-201ENST00000492453 205 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC095052.1-201ENST00000509955 863 ntBASIC5.84□□□□□ -1.47
RAE1P78406 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.84□□□□□ -1.47
RAE1P78406 SOX5P1-201ENST00000524155 1127 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.84□□□□□ -1.47
RAE1P78406 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 CLIC4P2-201ENST00000601934 717 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.84□□□□□ -1.47
RAE1P78406 AC068620.3-201ENST00000602749 560 ntBASIC5.84□□□□□ -1.47
RAE1P78406 RPSAP75-201ENST00000605848 301 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AC012213.4-201ENST00000606457 354 ntBASIC5.84□□□□□ -1.47
RAE1P78406 AP000864.1-201ENST00000609424 650 ntBASIC5.84□□□□□ -1.47
RAE1P78406 MIR1264-201ENST00000616374 69 ntBASIC5.84□□□□□ -1.47
RAE1P78406 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.84□□□□□ -1.47
RAE1P78406 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RAE1P78406 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.84□□□□□ -1.47
RAE1P78406 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RAE1P78406 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.84□□□□□ -1.48
RAE1P78406 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RAE1P78406 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
RAE1P78406 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 AC119674.1-202ENST00000641333 1860 ntBASIC5.83□□□□□ -1.48
RAE1P78406 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RAE1P78406 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms