Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 snoU109.5-201ENST00000516231 132 ntBASIC5.16□□□□□ -1.58
UBA52P62987 RNA5SP206-201ENST00000516703 121 ntBASIC5.16□□□□□ -1.58
UBA52P62987 RN7SKP35-201ENST00000517210 151 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.16□□□□□ -1.58
UBA52P62987 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 NANOGNBP2-201ENST00000544753 553 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 MRPS21P8-201ENST00000569196 235 ntBASIC5.16□□□□□ -1.58
UBA52P62987 TXNP4-201ENST00000575018 310 ntBASIC5.16□□□□□ -1.58
UBA52P62987 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.16□□□□□ -1.58
UBA52P62987 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.16□□□□□ -1.58
UBA52P62987 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 AC092266.1-201ENST00000610958 165 ntBASIC5.16□□□□□ -1.58
UBA52P62987 FAM27E2-201ENST00000619668 403 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 AL034546.1-201ENST00000623740 3693 ntBASIC5.16□□□□□ -1.58
UBA52P62987 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.16□□□□□ -1.58
UBA52P62987 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
UBA52P62987 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 PARP4P2-201ENST00000446672 3326 ntBASIC5.15□□□□□ -1.58
UBA52P62987 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
UBA52P62987 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.15□□□□□ -1.58
UBA52P62987 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
UBA52P62987 RNA5SP510-201ENST00000364697 99 ntBASIC5.15□□□□□ -1.59
UBA52P62987 AL157702.1-201ENST00000398764 426 ntBASIC5.15□□□□□ -1.59
UBA52P62987 RN7SKP206-201ENST00000410823 293 ntBASIC5.15□□□□□ -1.59
UBA52P62987 RN7SKP108-201ENST00000411367 328 ntBASIC5.15□□□□□ -1.59
UBA52P62987 AC079809.1-201ENST00000415468 276 ntBASIC5.15□□□□□ -1.59
UBA52P62987 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AL663074.2-201ENST00000440621 479 ntBASIC5.15□□□□□ -1.59
UBA52P62987 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 AC112187.1-201ENST00000455837 479 ntBASIC5.15□□□□□ -1.59
UBA52P62987 RN7SL214P-201ENST00000487317 265 ntBASIC5.15□□□□□ -1.59
UBA52P62987 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.15□□□□□ -1.59
UBA52P62987 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AC106800.3-201ENST00000511389 308 ntBASIC5.15□□□□□ -1.59
UBA52P62987 SCARNA21.2-201ENST00000516600 166 ntBASIC5.15□□□□□ -1.59
UBA52P62987 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.15□□□□□ -1.59
UBA52P62987 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.15□□□□□ -1.59
UBA52P62987 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 ZNF322P1-201ENST00000568013 1209 ntBASIC5.15□□□□□ -1.59
UBA52P62987 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.15□□□□□ -1.59
UBA52P62987 AC092681.3-201ENST00000609463 678 ntBASIC5.15□□□□□ -1.59
UBA52P62987 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.15□□□□□ -1.59
UBA52P62987 AC024884.1-201ENST00000620583 399 ntBASIC5.15□□□□□ -1.59
UBA52P62987 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
UBA52P62987 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UBA52P62987 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
UBA52P62987 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UBA52P62987 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UBA52P62987 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.15□□□□□ -1.59
UBA52P62987 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.15□□□□□ -1.59
UBA52P62987 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.14□□□□□ -1.59
UBA52P62987 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 KARSP1-201ENST00000451871 1752 ntBASIC5.14□□□□□ -1.59
UBA52P62987 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 MTCO1P28-201ENST00000574177 1528 ntBASIC5.14□□□□□ -1.59
UBA52P62987 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.14□□□□□ -1.59
UBA52P62987 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 AC140479.2-201ENST00000421567 3130 ntBASIC5.14□□□□□ -1.59
UBA52P62987 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.14□□□□□ -1.59
UBA52P62987 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 SNORA51.9-201ENST00000384295 124 ntBASIC5.14□□□□□ -1.59
UBA52P62987 MIR433-201ENST00000384837 93 ntBASIC5.14□□□□□ -1.59
UBA52P62987 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.14□□□□□ -1.59
UBA52P62987 RN7SKP281-201ENST00000410472 352 ntBASIC5.14□□□□□ -1.59
UBA52P62987 AC066692.1-201ENST00000421721 457 ntBASIC5.14□□□□□ -1.59
UBA52P62987 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.14□□□□□ -1.59
UBA52P62987 HMGN2P27-201ENST00000427352 270 ntBASIC5.14□□□□□ -1.59
UBA52P62987 AC104843.2-201ENST00000427666 297 ntBASIC5.14□□□□□ -1.59
UBA52P62987 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBA52P62987 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.14□□□□□ -1.59
UBA52P62987 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms