Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CKS1BP61024 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CKS1BP61024 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CKS1BP61024 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.19□□□□□ -1.74
CKS1BP61024 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CKS1BP61024 AC107027.3-201ENST00000565095 3473 ntBASIC4.19□□□□□ -1.74
CKS1BP61024 AP001541.1-201ENST00000623322 1904 ntBASIC4.19□□□□□ -1.74
CKS1BP61024 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.19□□□□□ -1.74
CKS1BP61024 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 AL359091.1-201ENST00000449048 1734 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 AC073136.1-201ENST00000449426 2884 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CKS1BP61024 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 PPIAP24-201ENST00000328558 471 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CKS1BP61024 U3.52-201ENST00000384034 216 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC019178.1-201ENST00000392337 440 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 SOD1P1-201ENST00000407803 440 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 RN7SKP281-201ENST00000410472 352 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 AL672212.1-201ENST00000422246 400 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 MTND1P10-201ENST00000426108 832 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC009303.1-201ENST00000426307 352 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 CCNJP1-201ENST00000450600 1149 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 CFL1P4-201ENST00000451536 498 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC022080.2-201ENST00000452932 533 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 CBX1P2-201ENST00000453841 458 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 RANP2-201ENST00000456833 229 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 RPL5P15-201ENST00000475870 897 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 RPL7L1P7-201ENST00000509986 724 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 RN7SKP196-201ENST00000516267 345 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 RPA2P3-201ENST00000533268 770 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.18□□□□□ -1.74
CKS1BP61024 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 FCGR1CP-201ENST00000579737 1127 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 AC007347.2-201ENST00000623044 180 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AC061999.1-201ENST00000624454 177 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 AC011447.7-201ENST00000624228 1590 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 CASC19-238ENST00000641523 1558 ntBASIC4.18□□□□□ -1.74
CKS1BP61024 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CKS1BP61024 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.18□□□□□ -1.74
CKS1BP61024 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CKS1BP61024 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.18□□□□□ -1.74
CKS1BP61024 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.17□□□□□ -1.74
CKS1BP61024 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS1BP61024 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS1BP61024 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.17□□□□□ -1.74
CKS1BP61024 AC114876.1-201ENST00000490962 1366 ntBASIC4.17□□□□□ -1.74
CKS1BP61024 AL731566.1-201ENST00000620490 1937 ntBASIC4.17□□□□□ -1.74
CKS1BP61024 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS1BP61024 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CKS1BP61024 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CKS1BP61024 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CKS1BP61024 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms