Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
CLTCL1P53675 AC006206.1-201ENST00000544842 3387 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CLTCL1P53675 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.09□□□□□ -1.11
CLTCL1P53675 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CLTCL1P53675 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 RNA5SP319-201ENST00000362768 119 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.09□□□□□ -1.11
CLTCL1P53675 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.09□□□□□ -1.11
CLTCL1P53675 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.09□□□□□ -1.11
CLTCL1P53675 SLC25A51P1-201ENST00000468432 871 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 RPL17P2-201ENST00000491913 451 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 AC110775.1-201ENST00000513721 462 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.09□□□□□ -1.11
CLTCL1P53675 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.09□□□□□ -1.11
CLTCL1P53675 MIR6837-201ENST00000620884 64 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.09□□□□□ -1.11
CLTCL1P53675 AL359195.2-201ENST00000623657 4412 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.09□□□□□ -1.11
CLTCL1P53675 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CLTCL1P53675 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CLTCL1P53675 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLTCL1P53675 HSPD1P8-201ENST00000400121 1658 ntBASIC8.09□□□□□ -1.11
CLTCL1P53675 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.09□□□□□ -1.11
CLTCL1P53675 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
CLTCL1P53675 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CLTCL1P53675 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
CLTCL1P53675 AC022819.1-201ENST00000563495 3910 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 ZNF840P-201ENST00000504759 1996 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.08□□□□□ -1.12
CLTCL1P53675 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.08□□□□□ -1.12
CLTCL1P53675 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.08□□□□□ -1.12
CLTCL1P53675 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
CLTCL1P53675 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 RPL7L1P9-201ENST00000431298 745 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 OR5M14P-201ENST00000506803 618 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CLTCL1P53675 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.08□□□□□ -1.12
CLTCL1P53675 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
CLTCL1P53675 AC007938.2-201ENST00000604666 2634 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 CR383656.5-201ENST00000547616 1340 ntBASIC8.08□□□□□ -1.12
CLTCL1P53675 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.08□□□□□ -1.12
CLTCL1P53675 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CLTCL1P53675 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC8.08□□□□□ -1.12
CLTCL1P53675 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CLTCL1P53675 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
CLTCL1P53675 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLTCL1P53675 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 AL645927.1-201ENST00000396783 406 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.07□□□□□ -1.12
CLTCL1P53675 RPS17P17-201ENST00000419392 409 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 RPS23P2-201ENST00000463671 415 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.07□□□□□ -1.12
CLTCL1P53675 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.07□□□□□ -1.12
CLTCL1P53675 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 BLZF2P-201ENST00000553776 1130 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 AC007346.2-201ENST00000564816 892 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 AC118658.2-201ENST00000618697 459 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CLTCL1P53675 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.07□□□□□ -1.12
CLTCL1P53675 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
CLTCL1P53675 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CLTCL1P53675 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.07□□□□□ -1.12
CLTCL1P53675 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.07□□□□□ -1.12
CLTCL1P53675 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.07□□□□□ -1.12
CLTCL1P53675 RPSAP35-201ENST00000413753 818 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 DSTNP5-201ENST00000427921 523 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.07□□□□□ -1.12
CLTCL1P53675 RPL7P6-201ENST00000480903 738 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 AC015864.1-201ENST00000496512 544 ntBASIC8.07□□□□□ -1.12
CLTCL1P53675 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLTCL1P53675 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
CLTCL1P53675 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.07□□□□□ -1.12
CLTCL1P53675 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.07□□□□□ -1.12
CLTCL1P53675 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms