Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.04□□□□□ -1.44
BRCA2P51587 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.04□□□□□ -1.44
BRCA2P51587 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.04□□□□□ -1.44
BRCA2P51587 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.04□□□□□ -1.44
BRCA2P51587 AC034105.4-201ENST00000568304 277 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.04□□□□□ -1.44
BRCA2P51587 AC019193.2-201ENST00000610012 634 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 AC015660.5-201ENST00000623238 564 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 OR8B1P-202ENST00000641132 1178 ntBASIC6.04□□□□□ -1.44
BRCA2P51587 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BRCA2P51587 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BRCA2P51587 RNA5SP388-201ENST00000362584 119 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
BRCA2P51587 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 RBMY2TP-201ENST00000451162 947 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCA2P51587 HMGB1P40-201ENST00000525121 540 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCA2P51587 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
BRCA2P51587 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCA2P51587 AC096775.1-201ENST00000437724 448 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 MED28P3-201ENST00000444288 531 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 AC093720.1-201ENST00000505681 714 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.03□□□□□ -1.44
BRCA2P51587 AC008147.3-201ENST00000548666 354 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
BRCA2P51587 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 AL451062.2-201ENST00000427515 271 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 AC007559.1-201ENST00000428736 355 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCA2P51587 AC090424.1-201ENST00000535243 736 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCA2P51587 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCA2P51587 MIR6830-201ENST00000636015 70 ntBASIC6.03□□□□□ -1.44
BRCA2P51587 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC6.03□□□□□ -1.44
BRCA2P51587 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCA2P51587 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.03□□□□□ -1.44
BRCA2P51587 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
BRCA2P51587 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 RNA5SP44-201ENST00000410446 133 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AL359265.2-201ENST00000434367 631 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 SKA2-207ENST00000583380 583 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 AC060766.1-201ENST00000590824 627 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AL513327.3-201ENST00000602618 469 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AL391358.1-201ENST00000605342 190 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.02□□□□□ -1.45
BRCA2P51587 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCA2P51587 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCA2P51587 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 U3.22-201ENST00000391120 215 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AL590399.4-201ENST00000436561 601 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 MTND6P2-201ENST00000512226 524 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 RN7SKP99-201ENST00000517028 307 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 OR4H6P-201ENST00000563771 921 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 AC092653.1-201ENST00000608509 531 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AC090607.5-201ENST00000615692 224 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 AC099654.6-201ENST00000636487 512 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCA2P51587 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 AC139713.2-214ENST00000642059 1811 ntBASIC6.02□□□□□ -1.45
BRCA2P51587 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCA2P51587 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCA2P51587 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms