Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LCOR-201ENST00000286067 4542 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 U3.7-201ENST00000363668 216 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 RNU6-171P-201ENST00000384354 107 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 RNA5SP91-201ENST00000390902 119 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC9.13□□□□□ -0.95
CLIP1P30622 TNPO1P1-201ENST00000423641 1138 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.13□□□□□ -0.95
CLIP1P30622 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC9.13□□□□□ -0.95
CLIP1P30622 AC117409.1-201ENST00000470499 1310 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.13□□□□□ -0.95
CLIP1P30622 DUTP1-201ENST00000493631 470 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC9.13□□□□□ -0.95
CLIP1P30622 NRBF2P4-201ENST00000520874 850 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC9.13□□□□□ -0.95
CLIP1P30622 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC9.13□□□□□ -0.95
CLIP1P30622 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
CLIP1P30622 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
CLIP1P30622 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.12□□□□□ -0.95
CLIP1P30622 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.12□□□□□ -0.95
CLIP1P30622 AL049634.1-201ENST00000453770 1720 ntBASIC9.12□□□□□ -0.95
CLIP1P30622 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 AC114786.1-201ENST00000512892 1415 ntBASIC9.12□□□□□ -0.95
CLIP1P30622 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 AC235565.1-201ENST00000456962 1325 ntBASIC9.12□□□□□ -0.95
CLIP1P30622 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CLIP1P30622 DPPA2P3-201ENST00000411853 655 ntBASIC9.12□□□□□ -0.95
CLIP1P30622 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC9.12□□□□□ -0.95
CLIP1P30622 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC9.12□□□□□ -0.95
CLIP1P30622 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.12□□□□□ -0.95
CLIP1P30622 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC9.12□□□□□ -0.95
CLIP1P30622 UBA52P7-201ENST00000486088 380 ntBASIC9.12□□□□□ -0.95
CLIP1P30622 AC007683.2-201ENST00000624681 714 ntBASIC9.12□□□□□ -0.95
CLIP1P30622 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9.12□□□□□ -0.95
CLIP1P30622 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CLIP1P30622 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CLIP1P30622 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC9.11□□□□□ -0.95
CLIP1P30622 AL590763.1-201ENST00000398297 1545 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CLIP1P30622 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CLIP1P30622 CR1-204ENST00000367052 7469 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 CR1-205ENST00000367053 7469 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 GABARAPL3-201ENST00000412799 354 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC9.11□□□□□ -0.95
CLIP1P30622 AL390119.1-201ENST00000440329 312 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 VDAC2P4-201ENST00000452925 711 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 BX510359.5-201ENST00000515651 304 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC9.11□□□□□ -0.95
CLIP1P30622 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC9.11□□□□□ -0.95
CLIP1P30622 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CLIP1P30622 CCT5-215ENST00000625723 135 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 MAPK10-350ENST00000641777 965 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CLIP1P30622 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CLIP1P30622 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC9.11□□□□□ -0.95
CLIP1P30622 ATP5A1P4-201ENST00000556888 1605 ntBASIC9.11□□□□□ -0.95
CLIP1P30622 AC089998.1-201ENST00000548575 3141 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CLIP1P30622 AL021877.2-201ENST00000624442 10684 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CLIP1P30622 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
CLIP1P30622 RN7SKP59-201ENST00000410520 314 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC9.1□□□□□ -0.95
CLIP1P30622 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.1□□□□□ -0.95
CLIP1P30622 AC007394.1-201ENST00000421941 531 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 AC012075.1-201ENST00000436549 580 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
CLIP1P30622 AL450023.1-201ENST00000450868 751 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 RNU1-88P-201ENST00000459274 128 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC9.1□□□□□ -0.95
CLIP1P30622 AC078899.1-201ENST00000521432 1185 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
CLIP1P30622 AC139697.1-201ENST00000548429 745 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 AL049872.1-201ENST00000556323 322 ntBASIC9.1□□□□□ -0.95
CLIP1P30622 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC9.1□□□□□ -0.95
CLIP1P30622 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC9.1□□□□□ -0.95
CLIP1P30622 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.1□□□□□ -0.95
CLIP1P30622 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.1□□□□□ -0.95
CLIP1P30622 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CLIP1P30622 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC9.1□□□□□ -0.95
CLIP1P30622 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CLIP1P30622 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CLIP1P30622 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
CLIP1P30622 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CLIP1P30622 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CLIP1P30622 AP004607.3-201ENST00000530354 3915 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms