Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.39□□□□□ -1.07
PTPRMP28827 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PTPRMP28827 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PTPRMP28827 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PTPRMP28827 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 RNA5SP123-201ENST00000363244 119 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 RNA5SP505-201ENST00000364748 108 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.38□□□□□ -1.07
PTPRMP28827 PRUNEP1-201ENST00000425846 705 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.38□□□□□ -1.07
PTPRMP28827 AL451136.1-201ENST00000435399 325 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 AC006335.2-201ENST00000437993 330 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 AL022237.1-201ENST00000446663 358 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 NDUFA12P1-201ENST00000455914 406 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 RPS23P7-201ENST00000466210 444 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 AC073581.1-201ENST00000519036 575 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 AC092490.3-201ENST00000545370 572 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 AC020765.1-201ENST00000604296 328 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.38□□□□□ -1.07
PTPRMP28827 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 ABCA11P-202ENST00000504019 2110 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 RNU4-2-201ENST00000365668 141 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 CDY5P-201ENST00000411487 1580 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.38□□□□□ -1.07
PTPRMP28827 AL133482.1-201ENST00000415988 498 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPRMP28827 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPRMP28827 CDY9P-201ENST00000451397 1580 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 RPL7AP28-201ENST00000464513 571 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPRMP28827 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
PTPRMP28827 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPRMP28827 TVP23CP2-201ENST00000571473 623 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 MIR5096-201ENST00000583713 70 ntBASIC8.38□□□□□ -1.07
PTPRMP28827 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
PTPRMP28827 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.37□□□□□ -1.07
PTPRMP28827 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPRMP28827 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPRMP28827 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPRMP28827 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
PTPRMP28827 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPRMP28827 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 FAM32BP-201ENST00000344033 333 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 SNORA11C-201ENST00000408532 129 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 RPL23AP18-201ENST00000416139 468 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 OR6D1P-201ENST00000436165 939 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 RN7SL165P-201ENST00000477476 291 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 RN7SL570P-201ENST00000484405 292 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 AC026979.1-201ENST00000492525 396 ntBASIC8.37□□□□□ -1.07
PTPRMP28827 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC8.37□□□□□ -1.07
PTPRMP28827 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC8.37□□□□□ -1.07
PTPRMP28827 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPRMP28827 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
PTPRMP28827 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.37□□□□□ -1.07
PTPRMP28827 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPRMP28827 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms