Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 AP000526.1-201ENST00000603308 1388 ntBASIC8.34□□□□□ -1.07
RXRBP28702 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 AL607077.1-201ENST00000401718 499 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AL589655.1-201ENST00000405398 482 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AL049697.3-201ENST00000406493 982 ntBASIC8.33□□□□□ -1.08
RXRBP28702 LSM5-203ENST00000409782 649 ntTSL 5 BASIC8.33□□□□□ -1.08
RXRBP28702 RNA5SP156-201ENST00000410250 110 ntBASIC8.33□□□□□ -1.08
RXRBP28702 OR51B3P-201ENST00000412287 913 ntBASIC8.33□□□□□ -1.08
RXRBP28702 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
RXRBP28702 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC8.33□□□□□ -1.08
RXRBP28702 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 AC013283.1-201ENST00000557282 492 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC8.33□□□□□ -1.08
RXRBP28702 STARD6-202ENST00000577499 696 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 AC016839.1-201ENST00000578162 867 ntBASIC8.33□□□□□ -1.08
RXRBP28702 MIR4509-3-201ENST00000578671 94 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AP005136.1-201ENST00000579765 429 ntBASIC8.33□□□□□ -1.08
RXRBP28702 MIR4776-2-201ENST00000580204 80 ntBASIC8.33□□□□□ -1.08
RXRBP28702 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RXRBP28702 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RXRBP28702 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.33□□□□□ -1.08
RXRBP28702 MIR4509-2-201ENST00000583920 94 ntBASIC8.33□□□□□ -1.08
RXRBP28702 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 PCNAP1-202ENST00000595299 752 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC8.33□□□□□ -1.08
RXRBP28702 RPP40P2-201ENST00000603596 712 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.33□□□□□ -1.08
RXRBP28702 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 MIR4509-1-201ENST00000618224 94 ntBASIC8.33□□□□□ -1.08
RXRBP28702 AC008115.4-201ENST00000619780 775 ntBASIC8.33□□□□□ -1.08
RXRBP28702 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.33□□□□□ -1.08
RXRBP28702 AP001784.1-201ENST00000624107 428 ntBASIC8.33□□□□□ -1.08
RXRBP28702 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
RXRBP28702 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 TRIM51HP-202ENST00000530412 1823 ntBASIC8.33□□□□□ -1.08
RXRBP28702 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
RXRBP28702 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RXRBP28702 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
RXRBP28702 SAGE3P-201ENST00000619800 1635 ntBASIC8.32□□□□□ -1.08
RXRBP28702 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 AC079949.2-201ENST00000617117 2933 ntBASIC8.32□□□□□ -1.08
RXRBP28702 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RXRBP28702 ATP5F1P2-201ENST00000398143 760 ntBASIC8.32□□□□□ -1.08
RXRBP28702 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.32□□□□□ -1.08
RXRBP28702 AL512637.2-201ENST00000431287 1256 ntBASIC8.32□□□□□ -1.08
RXRBP28702 MTND2P5-201ENST00000432656 1006 ntBASIC8.32□□□□□ -1.08
RXRBP28702 MAPRE1P3-201ENST00000435438 796 ntBASIC8.32□□□□□ -1.08
RXRBP28702 RPS12P17-201ENST00000438591 377 ntBASIC8.32□□□□□ -1.08
RXRBP28702 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 CRYGGP-201ENST00000443337 145 ntBASIC8.32□□□□□ -1.08
RXRBP28702 FTLP8-201ENST00000446770 267 ntBASIC8.32□□□□□ -1.08
RXRBP28702 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.32□□□□□ -1.08
RXRBP28702 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
RXRBP28702 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC8.32□□□□□ -1.08
RXRBP28702 MTCO2P9-201ENST00000503214 694 ntBASIC8.32□□□□□ -1.08
RXRBP28702 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC8.32□□□□□ -1.08
RXRBP28702 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.32□□□□□ -1.08
RXRBP28702 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC8.32□□□□□ -1.08
RXRBP28702 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 UBE2CP1-201ENST00000557130 554 ntBASIC8.32□□□□□ -1.08
RXRBP28702 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.32□□□□□ -1.08
RXRBP28702 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
RXRBP28702 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC8.32□□□□□ -1.08
RXRBP28702 AC018926.1-201ENST00000616335 435 ntBASIC8.32□□□□□ -1.08
RXRBP28702 AC011330.2-201ENST00000621680 635 ntBASIC8.32□□□□□ -1.08
RXRBP28702 AL590396.4-201ENST00000636779 956 ntBASIC8.32□□□□□ -1.08
RXRBP28702 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms