Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.9□□□□□ -1.46
XRCC1P18887 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.9□□□□□ -1.46
XRCC1P18887 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 OR7E158P-201ENST00000524483 910 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.9□□□□□ -1.46
XRCC1P18887 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 RNU4ATAC-201ENST00000580972 127 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 AL136131.3-201ENST00000607600 188 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 MIR6809-201ENST00000612189 116 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 MIR6793-201ENST00000612376 63 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 AC129915.3-201ENST00000634128 948 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.9□□□□□ -1.46
XRCC1P18887 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 AC090220.1-201ENST00000593078 1699 ntBASIC5.9□□□□□ -1.47
XRCC1P18887 AC092451.3-201ENST00000625067 1343 ntBASIC5.9□□□□□ -1.47
XRCC1P18887 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.9□□□□□ -1.47
XRCC1P18887 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
XRCC1P18887 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
XRCC1P18887 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
XRCC1P18887 NLRP3P1-201ENST00000622303 1785 ntBASIC5.9□□□□□ -1.47
XRCC1P18887 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
XRCC1P18887 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
XRCC1P18887 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.9□□□□□ -1.47
XRCC1P18887 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
XRCC1P18887 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
XRCC1P18887 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 AC027279.4-201ENST00000624371 2072 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
XRCC1P18887 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
XRCC1P18887 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
XRCC1P18887 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 OR7E25P-201ENST00000344844 931 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 RN7SKP77-201ENST00000363261 353 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 U3.10-201ENST00000364459 214 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 RPL35AP3-201ENST00000414680 288 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 CDY8P-201ENST00000428380 1279 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 CDY20P-201ENST00000447528 1279 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 RAB28P2-201ENST00000454299 641 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.89□□□□□ -1.47
XRCC1P18887 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.89□□□□□ -1.47
XRCC1P18887 AC084754.1-201ENST00000463466 464 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 TRBV5-2-201ENST00000489095 273 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 RN7SL193P-201ENST00000491708 276 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 RNA5SP271-201ENST00000516700 88 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.89□□□□□ -1.47
XRCC1P18887 AC110056.1-201ENST00000525759 911 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.89□□□□□ -1.47
XRCC1P18887 AL049779.3-201ENST00000557141 606 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 NPM1P5-201ENST00000557228 838 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.89□□□□□ -1.47
XRCC1P18887 AP001962.1-201ENST00000624114 559 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.89□□□□□ -1.47
XRCC1P18887 AC012254.3-201ENST00000591183 2117 ntBASIC5.89□□□□□ -1.47
XRCC1P18887 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
XRCC1P18887 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.89□□□□□ -1.47
XRCC1P18887 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
XRCC1P18887 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 AC006600.2-201ENST00000624834 2506 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 AL161756.3-201ENST00000641216 2071 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
XRCC1P18887 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
XRCC1P18887 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
XRCC1P18887 SETP9-201ENST00000423837 832 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.88□□□□□ -1.47
XRCC1P18887 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.88□□□□□ -1.47
XRCC1P18887 CR383656.1-201ENST00000484916 377 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.88□□□□□ -1.47
XRCC1P18887 SETP21-201ENST00000514799 892 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 Y_RNA.667-201ENST00000516212 107 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 RNA5SP438-201ENST00000516561 112 ntBASIC5.88□□□□□ -1.47
XRCC1P18887 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.88□□□□□ -1.47
XRCC1P18887 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
XRCC1P18887 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.88□□□□□ -1.47
XRCC1P18887 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.88□□□□□ -1.47
XRCC1P18887 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.88□□□□□ -1.47
XRCC1P18887 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.88□□□□□ -1.47
XRCC1P18887 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.88□□□□□ -1.47
XRCC1P18887 AC119403.2-201ENST00000590960 598 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms