Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 AC010624.4-201ENST00000597606 1351 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 AC008549.2-201ENST00000333482 706 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL6A2P12110 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 RNA5SP474-201ENST00000391234 90 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL6A2P12110 ATF1P1-201ENST00000406040 927 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 FCF1P5-201ENST00000406490 482 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 MIR1302-8-201ENST00000408342 128 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 AL353803.3-201ENST00000444641 335 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.62□□□□□ -1.35
COL6A2P12110 AL929410.2-201ENST00000451170 189 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 RPL7P45-201ENST00000455851 743 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC079193.1-201ENST00000460497 588 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 RN7SL216P-201ENST00000471607 298 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AC135999.1-201ENST00000478962 479 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC011037.1-201ENST00000483964 558 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 RPL17P2-201ENST00000491913 451 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.62□□□□□ -1.35
COL6A2P12110 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 MRPL49P1-201ENST00000505951 535 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC095052.1-201ENST00000509955 863 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 MTCYBP44-201ENST00000514835 823 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC007346.1-201ENST00000569208 867 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 AC011497.2-201ENST00000600255 639 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 BMS1P7-201ENST00000602440 1052 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL590032.1-201ENST00000604920 252 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AC080013.3-201ENST00000606839 578 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AC012510.1-201ENST00000607946 759 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL360219.1-201ENST00000610230 366 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL138478.1-201ENST00000612252 832 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL161931.1-201ENST00000612768 246 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL352984.2-202ENST00000613699 155 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 TCL6_3.1-201ENST00000619064 137 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 AL121895.2-201ENST00000619558 447 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 MIR665-201ENST00000635949 72 ntBASIC6.62□□□□□ -1.35
COL6A2P12110 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.62□□□□□ -1.35
COL6A2P12110 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL6A2P12110 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
COL6A2P12110 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.62□□□□□ -1.35
COL6A2P12110 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL6A2P12110 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 AL390862.1-201ENST00000635467 1469 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 PWRN1-212ENST00000569908 1435 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL6A2P12110 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL6A2P12110 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 AL050335.1-201ENST00000396909 869 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RPL10P10-201ENST00000403509 664 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AL356131.1-201ENST00000405826 414 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RN7SKP296-201ENST00000411185 341 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RPS7P12-201ENST00000422385 582 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 CYCSP52-201ENST00000422857 310 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AL390023.1-201ENST00000428836 262 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RPS10P21-201ENST00000430654 475 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AL365396.1-201ENST00000430854 671 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms