Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 BRD7P1-201ENST00000557705 1915 ntBASIC7.56□□□□□ -1.2
RARAP10276 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RARAP10276 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RARAP10276 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 AC016716.1-201ENST00000265882 708 ntBASIC7.56□□□□□ -1.2
RARAP10276 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RARAP10276 Y_RNA.11-201ENST00000362375 109 ntBASIC7.56□□□□□ -1.2
RARAP10276 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 SNORA75-201ENST00000384158 137 ntBASIC7.56□□□□□ -1.2
RARAP10276 RNU6-114P-201ENST00000384704 105 ntBASIC7.56□□□□□ -1.2
RARAP10276 SNORD65-201ENST00000391079 73 ntBASIC7.56□□□□□ -1.2
RARAP10276 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 AL079341.1-201ENST00000404701 1207 ntBASIC7.56□□□□□ -1.2
RARAP10276 AL512430.2-201ENST00000406786 339 ntBASIC7.56□□□□□ -1.2
RARAP10276 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.56□□□□□ -1.2
RARAP10276 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 MED14P1-201ENST00000430517 648 ntBASIC7.56□□□□□ -1.2
RARAP10276 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.56□□□□□ -1.2
RARAP10276 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 AL354983.1-201ENST00000434580 906 ntBASIC7.56□□□□□ -1.2
RARAP10276 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 UBE2V1P8-201ENST00000437166 265 ntBASIC7.56□□□□□ -1.2
RARAP10276 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 CCNJP2-201ENST00000457810 1163 ntBASIC7.56□□□□□ -1.2
RARAP10276 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.56□□□□□ -1.2
RARAP10276 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.56□□□□□ -1.2
RARAP10276 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.56□□□□□ -1.2
RARAP10276 SUMO2P7-201ENST00000511179 285 ntBASIC7.56□□□□□ -1.2
RARAP10276 RNU6-678P-201ENST00000516832 109 ntBASIC7.56□□□□□ -1.2
RARAP10276 AP003392.2-201ENST00000527269 208 ntBASIC7.56□□□□□ -1.2
RARAP10276 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.56□□□□□ -1.2
RARAP10276 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.56□□□□□ -1.2
RARAP10276 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.56□□□□□ -1.2
RARAP10276 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.56□□□□□ -1.2
RARAP10276 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.56□□□□□ -1.2
RARAP10276 NDUFA3P1-201ENST00000588007 252 ntBASIC7.56□□□□□ -1.2
RARAP10276 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.56□□□□□ -1.2
RARAP10276 AC083899.3-201ENST00000603413 594 ntBASIC7.56□□□□□ -1.2
RARAP10276 AP001554.1-201ENST00000604533 376 ntBASIC7.56□□□□□ -1.2
RARAP10276 AL645933.2-201ENST00000606743 1207 ntBASIC7.56□□□□□ -1.2
RARAP10276 RNU4-89P-201ENST00000607443 133 ntBASIC7.56□□□□□ -1.2
RARAP10276 AC097505.1-201ENST00000610199 565 ntBASIC7.56□□□□□ -1.2
RARAP10276 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 RMST_5.1-201ENST00000618704 126 ntBASIC7.56□□□□□ -1.2
RARAP10276 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.56□□□□□ -1.2
RARAP10276 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.56□□□□□ -1.2
RARAP10276 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 CASC19-243ENST00000641588 1546 ntBASIC7.56□□□□□ -1.2
RARAP10276 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RARAP10276 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RARAP10276 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.56□□□□□ -1.2
RARAP10276 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RARAP10276 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.55□□□□□ -1.2
RARAP10276 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
RARAP10276 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.55□□□□□ -1.2
RARAP10276 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 AC132825.1-201ENST00000463573 2247 ntBASIC7.55□□□□□ -1.2
RARAP10276 TTC39DP-201ENST00000416781 1688 ntBASIC7.55□□□□□ -1.2
RARAP10276 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 IL6STP1-201ENST00000346911 1020 ntBASIC7.55□□□□□ -1.2
RARAP10276 RNA5SP396-201ENST00000364834 120 ntBASIC7.55□□□□□ -1.2
RARAP10276 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
RARAP10276 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.55□□□□□ -1.2
RARAP10276 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RARAP10276 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.55□□□□□ -1.2
RARAP10276 CEACAMP8-201ENST00000413902 580 ntBASIC7.55□□□□□ -1.2
RARAP10276 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.55□□□□□ -1.2
RARAP10276 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.55□□□□□ -1.2
RARAP10276 GSTA6P-201ENST00000424144 582 ntBASIC7.55□□□□□ -1.2
RARAP10276 AL357632.1-201ENST00000426688 643 ntBASIC7.55□□□□□ -1.2
RARAP10276 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.55□□□□□ -1.2
RARAP10276 ZNF619P1-201ENST00000446539 752 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms