Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AOX3P-204ENST00000491025 2107 ntBASIC6.68□□□□□ -1.34
HOXC6P09630 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HOXC6P09630 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC6P09630 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC6P09630 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 LINC02019-201ENST00000608605 2060 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HOXC6P09630 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
HOXC6P09630 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 GAPDHP24-201ENST00000328713 983 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 SNORA74A-201ENST00000364089 198 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.67□□□□□ -1.34
HOXC6P09630 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.67□□□□□ -1.34
HOXC6P09630 FMO7P-201ENST00000436045 768 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.67□□□□□ -1.34
HOXC6P09630 AC006499.3-201ENST00000506077 748 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.67□□□□□ -1.34
HOXC6P09630 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXC6P09630 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXC6P09630 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.67□□□□□ -1.34
HOXC6P09630 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.67□□□□□ -1.34
HOXC6P09630 MRPS16P1-201ENST00000523462 412 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXC6P09630 AC044860.2-201ENST00000561005 179 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.67□□□□□ -1.34
HOXC6P09630 OR4H6P-201ENST00000563771 921 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 MIR4260-201ENST00000583107 67 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 SAMMSON-227ENST00000642114 1199 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.67□□□□□ -1.34
HOXC6P09630 YES1P1-201ENST00000418510 1628 ntBASIC6.67□□□□□ -1.34
HOXC6P09630 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HOXC6P09630 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC6P09630 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC011504.1-201ENST00000623331 4103 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC6P09630 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC013268.3-201ENST00000262716 2324 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC6P09630 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 HMGA1P8-201ENST00000414130 321 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXC6P09630 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 RFESDP1-201ENST00000422350 461 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AC007568.1-201ENST00000422912 471 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC079922.1-201ENST00000443291 359 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC6P09630 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXC6P09630 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 AP006245.2-201ENST00000522004 300 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC6P09630 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC6P09630 FKBP1AP1-201ENST00000594588 318 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AL118556.2-201ENST00000614375 824 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AC037198.3-201ENST00000616754 526 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AF117829.2-201ENST00000619538 361 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AP001885.1-201ENST00000621658 558 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AC004836.1-201ENST00000623032 634 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC6P09630 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC6P09630 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HOXC6P09630 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
HOXC6P09630 AC117409.1-201ENST00000470499 1310 ntBASIC6.66□□□□□ -1.34
HOXC6P09630 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms