Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TPM1P09493 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM1P09493 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.41□□□□□ -1.38
TPM1P09493 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 MTCO1P28-201ENST00000574177 1528 ntBASIC6.4□□□□□ -1.38
TPM1P09493 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TPM1P09493 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TPM1P09493 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.4□□□□□ -1.38
TPM1P09493 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.4□□□□□ -1.38
TPM1P09493 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 MUC2-202ENST00000613187 4845 ntBASIC6.4□□□□□ -1.38
TPM1P09493 SNORA21-201ENST00000362423 132 ntBASIC6.4□□□□□ -1.38
TPM1P09493 RN7SKP145-201ENST00000363291 303 ntBASIC6.4□□□□□ -1.38
TPM1P09493 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.4□□□□□ -1.38
TPM1P09493 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.4□□□□□ -1.38
TPM1P09493 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.4□□□□□ -1.38
TPM1P09493 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.4□□□□□ -1.38
TPM1P09493 AC130360.1-201ENST00000425489 1117 ntBASIC6.4□□□□□ -1.38
TPM1P09493 RPSAP65-201ENST00000429660 595 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC128677.1-201ENST00000436016 442 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.4□□□□□ -1.38
TPM1P09493 RN7SL393P-201ENST00000463588 296 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.4□□□□□ -1.38
TPM1P09493 AC117500.1-201ENST00000497352 755 ntBASIC6.4□□□□□ -1.38
TPM1P09493 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.4□□□□□ -1.38
TPM1P09493 AC008629.2-201ENST00000503783 483 ntBASIC6.4□□□□□ -1.38
TPM1P09493 SNX18P25-201ENST00000510539 758 ntBASIC6.4□□□□□ -1.38
TPM1P09493 SNORA74.1-201ENST00000516320 180 ntBASIC6.4□□□□□ -1.38
TPM1P09493 RNU6-964P-201ENST00000516524 69 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.4□□□□□ -1.38
TPM1P09493 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.4□□□□□ -1.38
TPM1P09493 AC110056.1-201ENST00000525759 911 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC130365.2-201ENST00000525882 1201 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AL359219.2-201ENST00000555184 348 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC005632.2-201ENST00000564271 828 ntBASIC6.4□□□□□ -1.38
TPM1P09493 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TPM1P09493 MIR212-201ENST00000586026 110 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.4□□□□□ -1.38
TPM1P09493 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.4□□□□□ -1.38
TPM1P09493 HIRAP1-201ENST00000605318 787 ntBASIC6.4□□□□□ -1.38
TPM1P09493 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.4□□□□□ -1.38
TPM1P09493 AP004607.3-201ENST00000530354 3915 ntBASIC6.4□□□□□ -1.39
TPM1P09493 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TPM1P09493 FBXL21-201ENST00000297158 1305 ntBASIC6.4□□□□□ -1.39
TPM1P09493 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TPM1P09493 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
TPM1P09493 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
TPM1P09493 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
TPM1P09493 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TPM1P09493 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TPM1P09493 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.39□□□□□ -1.39
TPM1P09493 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM1P09493 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TPM1P09493 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.39□□□□□ -1.39
TPM1P09493 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM1P09493 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM1P09493 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM1P09493 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TPM1P09493 AC010086.1-201ENST00000437359 1052 ntBASIC6.39□□□□□ -1.39
TPM1P09493 AC023141.8-201ENST00000442554 208 ntBASIC6.39□□□□□ -1.39
TPM1P09493 RPS10P18-201ENST00000442662 495 ntBASIC6.39□□□□□ -1.39
TPM1P09493 RPS7P3-201ENST00000443360 580 ntBASIC6.39□□□□□ -1.39
TPM1P09493 FTLP8-201ENST00000446770 267 ntBASIC6.39□□□□□ -1.39
TPM1P09493 NPM1P19-201ENST00000450070 712 ntBASIC6.39□□□□□ -1.39
TPM1P09493 RPSAP51-201ENST00000497462 645 ntBASIC6.39□□□□□ -1.39
TPM1P09493 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.39□□□□□ -1.39
TPM1P09493 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.39□□□□□ -1.39
TPM1P09493 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.39□□□□□ -1.39
TPM1P09493 AP004607.5-201ENST00000532034 217 ntBASIC6.39□□□□□ -1.39
TPM1P09493 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
TPM1P09493 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.39□□□□□ -1.39
TPM1P09493 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.39□□□□□ -1.39
TPM1P09493 AP005136.2-201ENST00000583253 1049 ntBASIC6.39□□□□□ -1.39
TPM1P09493 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.39□□□□□ -1.39
TPM1P09493 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.39□□□□□ -1.39
TPM1P09493 RPSAP75-201ENST00000605848 301 ntBASIC6.39□□□□□ -1.39
TPM1P09493 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.39□□□□□ -1.39
TPM1P09493 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.39□□□□□ -1.39
TPM1P09493 MIR6070-201ENST00000613967 103 ntBASIC6.39□□□□□ -1.39
TPM1P09493 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms