Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AL663074.2-201ENST00000440621 479 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 TRIM60P16-201ENST00000444048 694 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 WDR82P2-201ENST00000444540 928 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 AC097359.1-201ENST00000447946 463 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGN1P05114 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGN1P05114 OR7E157P-201ENST00000494376 911 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 OR7E99P-201ENST00000505750 922 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGN1P05114 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGN1P05114 OR7E158P-201ENST00000524483 910 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGN1P05114 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGN1P05114 BMS1P16-201ENST00000556075 1147 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGN1P05114 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGN1P05114 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGN1P05114 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGN1P05114 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 NANOGP3-201ENST00000605855 286 ntBASIC5.35□□□□□ -1.55
HMGN1P05114 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGN1P05114 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGN1P05114 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HMGN1P05114 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGN1P05114 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
HMGN1P05114 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HMGN1P05114 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGN1P05114 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGN1P05114 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGN1P05114 RNU1-146P-201ENST00000364015 165 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 RN7SKP69-201ENST00000365390 305 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 RNGTTP1-201ENST00000420965 728 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 VN1R21P-201ENST00000426703 765 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 RPS27AP6-201ENST00000427962 448 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 PSMD10P2-201ENST00000432890 672 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AC138761.5-201ENST00000433967 325 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGN1P05114 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HMGN1P05114 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGN1P05114 AL031681.1-201ENST00000443304 400 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGN1P05114 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGN1P05114 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGN1P05114 AC117500.1-201ENST00000497352 755 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 RFPL4AP5-201ENST00000514977 504 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGN1P05114 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AC110056.1-201ENST00000525759 911 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AP004607.5-201ENST00000532034 217 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGN1P05114 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
HMGN1P05114 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGN1P05114 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGN1P05114 NDUFB9P1-201ENST00000604683 510 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGN1P05114 MIR6070-201ENST00000613967 103 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 AC015712.7-201ENST00000615211 635 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 BNIP3P41-202ENST00000616656 861 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGN1P05114 TMEM30CP-203ENST00000637814 1035 ntBASIC5.34□□□□□ -1.55
HMGN1P05114 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGN1P05114 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGN1P05114 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGN1P05114 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGN1P05114 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HMGN1P05114 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGN1P05114 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HMGN1P05114 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HMGN1P05114 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGN1P05114 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGN1P05114 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 AC092646.1-201ENST00000427142 901 ntBASIC5.33□□□□□ -1.56
HMGN1P05114 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGN1P05114 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGN1P05114 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HMGN1P05114 RN7SL393P-201ENST00000463588 296 ntBASIC5.33□□□□□ -1.56
HMGN1P05114 RPL12P24-201ENST00000474907 486 ntBASIC5.33□□□□□ -1.56
HMGN1P05114 RPL38P3-201ENST00000484463 213 ntBASIC5.33□□□□□ -1.56
HMGN1P05114 AC131935.1-201ENST00000524621 333 ntBASIC5.33□□□□□ -1.56
HMGN1P05114 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGN1P05114 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGN1P05114 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGN1P05114 AC005632.2-201ENST00000564271 828 ntBASIC5.33□□□□□ -1.56
HMGN1P05114 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGN1P05114 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms