Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC007842.1-201ENST00000597336 2039 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 RN7SKP162-201ENST00000363605 345 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 RNA5SP211-201ENST00000365516 117 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 AL391422.1-201ENST00000402155 436 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.44□□□□□ -1.38
CHRNA1P02708 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.44□□□□□ -1.38
CHRNA1P02708 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.44□□□□□ -1.38
CHRNA1P02708 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.44□□□□□ -1.38
CHRNA1P02708 RNU6-615P-201ENST00000516065 106 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 HMGB1P42-201ENST00000532126 553 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC023389.2-201ENST00000580031 955 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 AC027334.1-201ENST00000603257 310 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.44□□□□□ -1.38
CHRNA1P02708 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.44□□□□□ -1.38
CHRNA1P02708 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 AP001885.1-201ENST00000621658 558 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHRNA1P02708 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 AP000547.3-204ENST00000588548 2523 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHRNA1P02708 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 NR1H5P-201ENST00000452683 1377 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 AC009779.8-201ENST00000641684 4384 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNA1P02708 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNA1P02708 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CHRNA1P02708 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 MYL6P5-201ENST00000412707 459 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNA1P02708 OR6E1P-201ENST00000414424 923 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 AL022331.1-201ENST00000429025 477 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNA1P02708 ACA64.4-201ENST00000459070 127 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 AL157777.1-201ENST00000468100 304 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNA1P02708 AC022215.1-201ENST00000481770 362 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNA1P02708 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.43□□□□□ -1.38
CHRNA1P02708 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.43□□□□□ -1.38
CHRNA1P02708 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 AC079395.2-201ENST00000610982 737 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 AL035661.1-201ENST00000620459 1144 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 USP9YP3-201ENST00000434481 1766 ntBASIC6.43□□□□□ -1.38
CHRNA1P02708 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
CHRNA1P02708 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHRNA1P02708 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNA1P02708 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNA1P02708 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNA1P02708 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNA1P02708 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CHRNA1P02708 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNA1P02708 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 RN7SKP124-201ENST00000364730 341 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.42□□□□□ -1.38
CHRNA1P02708 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNA1P02708 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.42□□□□□ -1.38
CHRNA1P02708 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.42□□□□□ -1.38
CHRNA1P02708 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 CYCSP51-201ENST00000443545 318 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 AC005297.1-201ENST00000444765 862 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 MYO5BP2-201ENST00000449815 1277 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 FRG2FP-204ENST00000453982 852 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 RN7SL72P-201ENST00000460697 269 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.42□□□□□ -1.38
CHRNA1P02708 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNA1P02708 SCARNA6.1-201ENST00000516989 238 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms