Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SPTA1P02549 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SPTA1P02549 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC5.39□□□□□ -1.55
SPTA1P02549 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC5.39□□□□□ -1.55
SPTA1P02549 AC013442.1-201ENST00000397347 228 ntBASIC5.39□□□□□ -1.55
SPTA1P02549 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.39□□□□□ -1.55
SPTA1P02549 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.39□□□□□ -1.55
SPTA1P02549 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.39□□□□□ -1.55
SPTA1P02549 AC092824.1-201ENST00000483524 576 ntBASIC5.39□□□□□ -1.55
SPTA1P02549 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.39□□□□□ -1.55
SPTA1P02549 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.39□□□□□ -1.55
SPTA1P02549 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.39□□□□□ -1.55
SPTA1P02549 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.39□□□□□ -1.55
SPTA1P02549 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SPTA1P02549 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 AC025809.2-201ENST00000625085 1802 ntBASIC5.39□□□□□ -1.55
SPTA1P02549 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.39□□□□□ -1.55
SPTA1P02549 FO393409.1-201ENST00000399325 1372 ntBASIC5.39□□□□□ -1.55
SPTA1P02549 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.39□□□□□ -1.55
SPTA1P02549 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SPTA1P02549 AC112255.1-201ENST00000624070 2493 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.38□□□□□ -1.55
SPTA1P02549 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.38□□□□□ -1.55
SPTA1P02549 OR6E1P-201ENST00000414424 923 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 KIF4CP-201ENST00000422742 1279 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC245047.2-201ENST00000441060 530 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC092967.1-201ENST00000449016 481 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 RPS26P41-201ENST00000450370 284 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 RPL7P61-201ENST00000451721 751 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.38□□□□□ -1.55
SPTA1P02549 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.38□□□□□ -1.55
SPTA1P02549 IGBP1P5-201ENST00000507524 1000 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 SUGT1P3-202ENST00000604259 383 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 Z95331.1-201ENST00000623075 23112 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.38□□□□□ -1.55
SPTA1P02549 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SPTA1P02549 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 AL590240.2-201ENST00000413370 894 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC091390.2-201ENST00000432573 374 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC073648.4-201ENST00000442655 781 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC093166.4-201ENST00000457867 318 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC100832.1-201ENST00000471945 383 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 RN7SL561P-201ENST00000488553 281 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC095057.1-201ENST00000507583 168 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC106800.2-201ENST00000514009 1103 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.38□□□□□ -1.55
SPTA1P02549 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 TVP23CP2-201ENST00000571473 623 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.38□□□□□ -1.55
SPTA1P02549 AC133644.2-201ENST00000608142 540 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC009163.6-201ENST00000612367 342 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC010168.2-201ENST00000562691 5428 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 AC105114.1-201ENST00000624795 1862 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SPTA1P02549 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
SPTA1P02549 ARHGAP42P2-201ENST00000416089 2140 ntBASIC5.38□□□□□ -1.55
SPTA1P02549 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SPTA1P02549 AC008957.3-201ENST00000624112 2242 ntBASIC5.37□□□□□ -1.55
SPTA1P02549 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SPTA1P02549 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms