Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC096775.1-201ENST00000437724 448 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 OR7E116P-201ENST00000448529 957 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.94□□□□□ -1.3
COL1A1P02452 VDAC2P4-201ENST00000452925 711 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.94□□□□□ -1.3
COL1A1P02452 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.94□□□□□ -1.3
COL1A1P02452 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.94□□□□□ -1.3
COL1A1P02452 AL512329.2-201ENST00000607350 548 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 AC068870.2-201ENST00000620635 389 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.94□□□□□ -1.3
COL1A1P02452 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL1A1P02452 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC068769.1-201ENST00000474767 2426 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.93□□□□□ -1.3
COL1A1P02452 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.93□□□□□ -1.3
COL1A1P02452 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.93□□□□□ -1.3
COL1A1P02452 AL450023.1-201ENST00000450868 751 ntBASIC6.93□□□□□ -1.3
COL1A1P02452 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.93□□□□□ -1.3
COL1A1P02452 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.93□□□□□ -1.3
COL1A1P02452 EIF1P7-201ENST00000487533 337 ntBASIC6.93□□□□□ -1.3
COL1A1P02452 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.93□□□□□ -1.3
COL1A1P02452 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.93□□□□□ -1.3
COL1A1P02452 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.93□□□□□ -1.3
COL1A1P02452 AC021678.3-201ENST00000517893 476 ntBASIC6.93□□□□□ -1.3
COL1A1P02452 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.93□□□□□ -1.3
COL1A1P02452 MIR6837-201ENST00000620884 64 ntBASIC6.93□□□□□ -1.3
COL1A1P02452 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
COL1A1P02452 AC007938.2-201ENST00000604666 2634 ntBASIC6.93□□□□□ -1.3
COL1A1P02452 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL1A1P02452 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.93□□□□□ -1.3
COL1A1P02452 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL1A1P02452 ZNF812P-201ENST00000457674 1694 ntBASIC6.93□□□□□ -1.3
COL1A1P02452 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL1A1P02452 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
COL1A1P02452 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL1A1P02452 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AC019205.1-201ENST00000421830 730 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.92□□□□□ -1.3
COL1A1P02452 AL606490.1-201ENST00000452266 765 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AL355032.1-201ENST00000472981 438 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 RN7SL570P-201ENST00000484405 292 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 RN7SL30P-201ENST00000488416 306 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 TRBV5-2-201ENST00000489095 273 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 AC015720.2-201ENST00000567709 334 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 FKBP1AP1-201ENST00000594588 318 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.92□□□□□ -1.3
COL1A1P02452 AC008115.3-201ENST00000614874 549 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.92□□□□□ -1.3
COL1A1P02452 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.92□□□□□ -1.3
COL1A1P02452 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 WBP11P1-201ENST00000562560 1931 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL1A1P02452 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.92□□□□□ -1.3
COL1A1P02452 RPS6P23-201ENST00000413224 722 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AL133173.1-201ENST00000423458 397 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL1A1P02452 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.92□□□□□ -1.3
COL1A1P02452 AC019185.1-201ENST00000442718 389 ntBASIC6.92□□□□□ -1.3
COL1A1P02452 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL1A1P02452 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms