Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.63□□□□□ -1.51
CLPTM1O96005 AL121878.1-201ENST00000418638 859 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 NMD3P2-201ENST00000421815 761 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.63□□□□□ -1.51
CLPTM1O96005 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 GAPDHP19-201ENST00000431768 1005 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 AC245291.3-201ENST00000443400 292 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.63□□□□□ -1.51
CLPTM1O96005 AC099670.1-201ENST00000455141 783 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 AC124945.1-201ENST00000485133 188 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CLPTM1O96005 OR7E157P-201ENST00000494376 911 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 RPL19P11-201ENST00000495944 589 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 OR7E99P-201ENST00000505750 922 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 TPM3P3-201ENST00000521343 354 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.63□□□□□ -1.51
CLPTM1O96005 AC133552.4-201ENST00000576103 676 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 MIR3157-201ENST00000578688 85 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 AC006115.2-201ENST00000596823 202 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 MIR6823-201ENST00000622118 61 ntBASIC5.63□□□□□ -1.51
CLPTM1O96005 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLPTM1O96005 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.63□□□□□ -1.51
CLPTM1O96005 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.63□□□□□ -1.51
CLPTM1O96005 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CLPTM1O96005 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 HSPA8P14-201ENST00000552265 1805 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLPTM1O96005 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 SNORA64.3-201ENST00000365647 134 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 SNORA81-201ENST00000408493 178 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC245096.1-201ENST00000413104 546 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 RANP7-201ENST00000418085 644 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 OR6R1P-201ENST00000431838 940 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AL020997.1-201ENST00000446554 349 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 RPS18P1-201ENST00000447840 458 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 YRDCP3-201ENST00000456507 480 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC092349.1-201ENST00000504903 310 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 SCARNA5-201ENST00000516201 276 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.62□□□□□ -1.51
CLPTM1O96005 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 EIF1AXP2-201ENST00000555940 413 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC037479.1-201ENST00000558361 625 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC090826.1-203ENST00000569235 490 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.62□□□□□ -1.51
CLPTM1O96005 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.62□□□□□ -1.51
CLPTM1O96005 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC006363.1-201ENST00000603806 463 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC092944.2-201ENST00000605443 889 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC243960.7-201ENST00000623532 707 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.62□□□□□ -1.51
CLPTM1O96005 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLPTM1O96005 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.62□□□□□ -1.51
CLPTM1O96005 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CLPTM1O96005 AL603750.1-201ENST00000624216 1717 ntBASIC5.62□□□□□ -1.51
CLPTM1O96005 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLPTM1O96005 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 GVINP1-202ENST00000531871 7271 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CLPTM1O96005 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 RNU1-84P-201ENST00000365447 164 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms