Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.63□□□□□ -1.67
SSSCA1O60232 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 RN7SL32P-201ENST00000580514 281 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 MIR4660-201ENST00000583549 74 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.63□□□□□ -1.67
SSSCA1O60232 RPL12P48-201ENST00000605620 304 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 AL139099.4-201ENST00000614802 114 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 AL122023.1-201ENST00000622847 530 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.63□□□□□ -1.67
SSSCA1O60232 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSSCA1O60232 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.63□□□□□ -1.67
SSSCA1O60232 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 OR4F13P-202ENST00000560066 2054 ntBASIC4.63□□□□□ -1.67
SSSCA1O60232 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSSCA1O60232 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.63□□□□□ -1.67
SSSCA1O60232 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SSSCA1O60232 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC005042.1-201ENST00000393397 800 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 PRELID1P1-201ENST00000403549 660 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 THEM7P-201ENST00000419556 672 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC117434.1-201ENST00000419971 836 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 HMGN1P32-201ENST00000441744 256 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AL590004.3-202ENST00000445883 451 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AL929410.2-201ENST00000451170 189 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AL354872.1-201ENST00000456361 967 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 RPS23P2-201ENST00000463671 415 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC023245.1-201ENST00000468501 517 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 MAST4-IT1-201ENST00000514241 658 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 SNORA70.11-201ENST00000515987 138 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 SNORA70.13-201ENST00000516116 138 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC138832.1-201ENST00000522871 556 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC090241.1-201ENST00000587732 621 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC012254.3-201ENST00000591183 2117 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC016590.3-201ENST00000611171 753 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 MIR6732-201ENST00000619365 60 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC079097.1-201ENST00000512187 1399 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSSCA1O60232 AC217777.1-201ENST00000570034 1471 ntBASIC4.62□□□□□ -1.67
SSSCA1O60232 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC090220.1-201ENST00000593078 1699 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 MAPK10-338ENST00000641647 3362 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC068870.1-201ENST00000563737 2455 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms