Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC067852.5-201ENST00000589299 310 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AL049840.5-201ENST00000602827 552 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC011891.2-201ENST00000604949 397 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 MIR6806-201ENST00000622141 64 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC006328.2-201ENST00000623198 397 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC120057.5-201ENST00000623840 154 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC012005.2-201ENST00000624333 397 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 OR8G3P-202ENST00000641572 1255 ntBASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA6Q9Y5G7 AC117409.1-201ENST00000470499 1310 ntBASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 AC020658.2-201ENST00000559030 4020 ntBASIC6.4□□□□□ -1.39
PCDHGA6Q9Y5G7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AL132640.2-201ENST00000559968 1698 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RNA5SP333-201ENST00000363466 118 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RNA5SP140-201ENST00000364524 92 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RNA5SP334-201ENST00000364825 118 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 ATF1P1-201ENST00000406040 927 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AL445183.3-201ENST00000414168 502 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC002069.1-201ENST00000429649 1159 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AL590128.1-201ENST00000433407 286 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 TPTE2P3-201ENST00000441562 1189 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 MTND1P33-201ENST00000446251 917 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 EXOSC3P1-201ENST00000448649 500 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 CCNJP1-201ENST00000450600 1149 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 Z95152.1-201ENST00000453556 656 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC118758.1-202ENST00000454719 225 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 MEF2AP1-201ENST00000454867 863 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC079080.1-201ENST00000479841 822 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 Y_RNA.717-201ENST00000517106 92 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 TDGP1-201ENST00000543961 1229 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC092375.1-201ENST00000550410 637 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AL132857.1-201ENST00000555180 708 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 RN7SL230P-201ENST00000580835 303 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC091133.5-201ENST00000603088 301 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 WBP1LP12-201ENST00000604449 331 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC026951.2-201ENST00000613847 241 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC089999.3-201ENST00000622440 577 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms