Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 RNA5SP346-201ENST00000363541 121 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 MIR7-1-201ENST00000384871 110 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AL050335.1-201ENST00000396909 869 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AL139039.2-201ENST00000407436 479 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 SLC20A1P1-201ENST00000413906 956 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 OR3D1P-201ENST00000438288 955 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AL158053.1-201ENST00000441503 453 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 CFL1P4-201ENST00000451536 498 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AL133351.3-201ENST00000454998 193 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC104629.1-201ENST00000494226 508 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 RN7SKP67-201ENST00000515905 235 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 RNU6-964P-201ENST00000516524 69 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC060775.1-201ENST00000518241 520 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 MIR4420-201ENST00000583944 77 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AP003117.1-201ENST00000602771 554 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 MIR6862-1-201ENST00000613016 70 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 MIR6862-2-201ENST00000614755 70 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC004801.6-201ENST00000616571 978 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 MIR7159-201ENST00000620587 66 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 SNX18P12-201ENST00000624821 759 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC009120.2-204ENST00000621548 2032 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC083837.1-201ENST00000565297 2994 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSX2IPQ9Y2D8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 RN7SKP78-201ENST00000364711 318 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 SUGT1P2-201ENST00000379452 992 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 RNU6-564P-201ENST00000410983 104 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC066692.1-201ENST00000421721 457 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 IPPKP1-201ENST00000422501 768 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 DNAJC19P5-201ENST00000443295 316 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 MORF4-201ENST00000447135 971 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 MGAT2P1-201ENST00000449718 797 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 PPIAP20-201ENST00000449839 135 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC002553.3-201ENST00000453002 341 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC104109.1-201ENST00000498563 436 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 MTND3P24-201ENST00000506306 329 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AP001804.1-201ENST00000526868 919 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 LINC00556-201ENST00000569603 412 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC012146.2-201ENST00000576545 416 ntBASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms