Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNA5SP178-201ENST00000410380 128 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 RPL12P12-201ENST00000424633 501 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC016027.5-201ENST00000427227 210 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 MTND6P12-201ENST00000428247 522 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AL161636.2-201ENST00000445179 927 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 RAB28P2-201ENST00000454299 641 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC011476.1-201ENST00000466725 307 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC092865.4-201ENST00000477936 615 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 RN7SL193P-201ENST00000491708 276 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC005244.1-201ENST00000582566 339 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC107993.1-201ENST00000591343 684 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC015849.6-201ENST00000605454 474 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AP003072.5-201ENST00000623872 773 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC018659.2-201ENST00000624690 715 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 OR7A1P-202ENST00000641542 1158 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC068769.1-201ENST00000474767 2426 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC034229.2-201ENST00000566945 2508 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC024587.1-201ENST00000505925 2157 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 MIR323A-201ENST00000362199 86 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 CDY17P-201ENST00000414121 1282 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 TRIM60P16-201ENST00000444048 694 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 VN1R96P-201ENST00000446052 858 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC135999.1-201ENST00000478962 479 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 SETP21-201ENST00000514799 892 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 HMGN2P47-201ENST00000559378 272 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC020916.2-201ENST00000591242 360 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 MIR6793-201ENST00000612376 63 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AL137067.2-201ENST00000621202 131 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 AL662795.2-201ENST00000624252 3706 ntBASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA1Q9UND3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms