Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 HNRNPCP1-201ENST00000556181 766 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC129778.1-202ENST00000623812 261 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AL591379.1-207ENST00000635982 261 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC116667.2-201ENST00000641075 823 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC007159.1-201ENST00000566529 4706 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AL132875.1-201ENST00000403623 949 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 GAPDHP48-201ENST00000436626 961 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AL663074.2-201ENST00000440621 479 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC104164.1-201ENST00000460282 590 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 RN7SL717P-201ENST00000478343 297 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC027544.3-201ENST00000535082 757 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC015802.2-201ENST00000589690 189 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 COX6CP7-201ENST00000597056 208 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC013244.1-201ENST00000604279 193 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 FAM72A-208ENST00000607379 1139 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 AC109309.2-201ENST00000612597 332 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 RN7SL544P-201ENST00000617232 284 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 RN7SL763P-201ENST00000620922 284 ntBASIC5.59□□□□□ -1.51
CCDC88CQ9P219 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC88CQ9P219 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC88CQ9P219 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC88CQ9P219 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.59□□□□□ -1.52
CCDC88CQ9P219 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC88CQ9P219 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC88CQ9P219 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC88CQ9P219 RNU1-59P-201ENST00000364829 162 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RPS3AP2-201ENST00000407190 754 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RN7SKP29-201ENST00000410957 272 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RAB28P2-201ENST00000454299 641 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC004129.2-201ENST00000457229 287 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 snoU13.29-201ENST00000459370 104 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RPL7P51-201ENST00000490532 749 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 SNORD95-201ENST00000579879 68 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AL353729.2-201ENST00000605859 1249 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 MIR6793-201ENST00000612376 63 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 U1.25-201ENST00000614085 162 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC022467.1-201ENST00000614738 749 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 U1.34-201ENST00000618578 162 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 U1.31-201ENST00000620022 160 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC245096.1-201ENST00000413104 546 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AL355433.1-201ENST00000422804 300 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 DNAJC19P5-201ENST00000443295 316 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RPL12P39-201ENST00000455456 496 ntBASIC5.58□□□□□ -1.52
CCDC88CQ9P219 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC88CQ9P219 RNA5SP116-201ENST00000516132 98 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms