Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 CCNT2P1-201ENST00000423082 1315 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 CASC19-243ENST00000641588 1546 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AL049634.1-201ENST00000453770 1720 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 SNORA17A-201ENST00000391185 133 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 RPS7P3-201ENST00000443360 580 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 RPL31P15-201ENST00000449770 338 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 SDC4P-201ENST00000453285 601 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AL122020.1-201ENST00000472287 459 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 RN7SL273P-201ENST00000481561 299 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC008629.2-201ENST00000503783 483 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 KCTD9P6-201ENST00000522306 950 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 IGLV3-30-201ENST00000524362 298 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 MTND2P17-201ENST00000550281 688 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 ZNF322P1-201ENST00000568013 1209 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC027334.1-201ENST00000603257 310 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC073111.2-201ENST00000605657 1075 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC127024.6-201ENST00000621598 424 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 SNORA17.5-201ENST00000630429 132 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 AC116667.2-201ENST00000641075 823 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
COL20A1Q9P218 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL20A1Q9P218 AL512283.1-201ENST00000606756 1384 ntBASIC6.82□□□□□ -1.32
COL20A1Q9P218 CUL4AP1-201ENST00000514750 1863 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 TMSB4XP4-201ENST00000323496 618 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 RN7SKP81-201ENST00000365603 331 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 MTND4LP7-201ENST00000431728 294 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL590762.3-201ENST00000436372 640 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL691517.1-201ENST00000440833 1235 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL161636.2-201ENST00000445179 927 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 TPM3P3-201ENST00000521343 354 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AP003049.1-201ENST00000529418 457 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 COX6CP7-201ENST00000597056 208 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC009237.12-201ENST00000604755 742 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL158211.2-201ENST00000607282 395 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL356752.1-201ENST00000615844 593 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC253576.2-201ENST00000618815 580 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC016583.1-201ENST00000624221 2431 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms