Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
BLOC1S4Q9NUP1 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AP003486.1-201ENST00000525716 3994 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 ZNF658B-201ENST00000602828 3408 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AF287957.1-201ENST00000607368 1595 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 RNU6-386P-201ENST00000362650 107 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 RNU6-819P-201ENST00000364116 107 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 SEPT7P8-201ENST00000413308 775 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 RPS4XP5-201ENST00000419038 768 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AL663074.2-201ENST00000440621 479 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 ATP5LP2-201ENST00000440646 311 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AL161722.1-201ENST00000446972 1032 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 C1DP3-201ENST00000455013 423 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AL603882.1-201ENST00000463059 681 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AL157777.1-201ENST00000468100 304 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC092865.4-201ENST00000477936 615 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AP002981.1-201ENST00000517692 975 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 BCAS2P1-201ENST00000528022 632 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 RPA2P1-201ENST00000556557 721 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC107958.1-201ENST00000556576 290 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC079791.1-201ENST00000605356 973 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 BNIP3P7-201ENST00000605641 516 ntBASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BLOC1S4Q9NUP1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 RNA5SP273-201ENST00000362484 113 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 SNRPFP2-201ENST00000440710 251 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 CFL1P4-201ENST00000451536 498 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC068228.1-201ENST00000461723 211 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 RN7SL170P-201ENST00000487098 295 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 RN7SL193P-201ENST00000491708 276 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 LSM3P4-201ENST00000502948 309 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC079905.1-201ENST00000549280 475 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 FAM60CP-201ENST00000591086 664 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 AC073592.6-201ENST00000624271 415 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 MTND5P23-201ENST00000430812 1655 ntBASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.61□□□□□ -1.35
BLOC1S4Q9NUP1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms