Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC079949.2-201ENST00000617117 2933 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC025263.3-201ENST00000622965 1396 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC104162.1-201ENST00000430831 2382 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC005225.5-201ENST00000623547 2225 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 PPIAP22-201ENST00000358455 498 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 SNORD116-1-201ENST00000384335 95 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AL451061.1-201ENST00000407887 862 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 NRBF2P2-201ENST00000413087 861 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 RPL34P19-201ENST00000415903 342 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AL593856.1-201ENST00000419949 805 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 USP9YP26-201ENST00000421008 661 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC092809.1-201ENST00000441469 474 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 RPL21P134-201ENST00000453468 483 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AL109741.2-201ENST00000455561 343 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 RBMY2EP-202ENST00000456360 940 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 WBP1LP4-201ENST00000505043 344 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC073358.1-201ENST00000505671 684 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC093325.1-201ENST00000508378 326 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 NACAP6-201ENST00000509572 622 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC109445.1-201ENST00000512356 383 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 IGKV2-36-201ENST00000519999 223 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AP001803.1-201ENST00000525668 147 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC090888.1-201ENST00000561335 1141 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC138749.2-201ENST00000566048 167 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 MTCYBP33-201ENST00000575007 1130 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AP003973.1-201ENST00000604639 691 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AL451074.6-201ENST00000608512 729 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC018926.3-201ENST00000618841 406 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC018659.2-201ENST00000624690 715 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC007671.2-201ENST00000637344 619 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 MRE11P1-201ENST00000464884 2127 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC053481.2-202ENST00000582394 1500 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 AC006116.1-201ENST00000587908 2171 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 UGT2B25P-201ENST00000511504 1586 ntBASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRAIPQ9BWF2 ASNSP6-201ENST00000592770 1618 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms