Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC006511.3-201ENST00000624929 1783 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL355377.1-201ENST00000621125 1653 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC137056.2-201ENST00000624055 1958 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AL390774.1-201ENST00000411924 246 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 RPL7L1P9-201ENST00000431298 745 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC006335.2-201ENST00000437993 330 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 AURKAPS1-201ENST00000451805 1212 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AP000547.1-201ENST00000454360 617 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC108161.1-201ENST00000461060 402 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 TPM3P3-201ENST00000521343 354 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC126615.2-201ENST00000553003 515 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 AP002884.5-201ENST00000595053 1132 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 AC004890.3-201ENST00000605566 1095 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 DOCK11P1-201ENST00000553480 5932 ntBASIC7.02□□□□□ -1.29
SNED1Q8TER0 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNED1Q8TER0 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.02□□□□□ -1.29
SNED1Q8TER0 RPSAP50-201ENST00000481955 852 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 OR11J2P-201ENST00000555298 907 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 MRPS21P7-201ENST00000566937 238 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 MIR132-201ENST00000591554 101 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC012616.1-201ENST00000600294 197 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC000068.2-201ENST00000608816 460 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AL450226.2-201ENST00000622913 439 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC130304.1-201ENST00000622942 2385 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 RN7SKP115-201ENST00000363177 317 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 SNORD8-201ENST00000363915 110 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 MIR765-201ENST00000390226 114 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AP003170.5-201ENST00000397185 335 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC116036.1-201ENST00000412199 367 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC007562.1-201ENST00000421819 517 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC023274.2-201ENST00000445264 521 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 RPL7P61-201ENST00000451721 751 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 RAB28P2-201ENST00000454299 641 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 AC110775.1-201ENST00000513721 462 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 TAS2R6P-201ENST00000605022 826 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms