Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC027279.4-201ENST00000624371 2072 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 RPL24P4-201ENST00000326586 421 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AL033519.1-201ENST00000407266 307 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CCDC58P2-201ENST00000417131 366 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC000089.1-201ENST00000424559 801 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AHCYP8-201ENST00000425108 209 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 RWDD4P2-201ENST00000426392 563 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 ELOCP10-201ENST00000440624 327 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 MTCO1P19-201ENST00000443487 500 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC234781.3-201ENST00000452540 973 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC010878.1-201ENST00000456500 1047 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 RN7SL70P-201ENST00000478322 302 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC068724.1-201ENST00000487100 792 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 TPT1P3-201ENST00000492841 512 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 MTCYBP44-201ENST00000514835 823 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC027801.3-201ENST00000515049 698 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC022447.1-201ENST00000515358 464 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC093878.1-201ENST00000515630 432 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 RNU6-1028P-201ENST00000517164 93 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 IGKV2D-38-201ENST00000518423 240 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 VN1R90P-201ENST00000595717 726 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 MTCYBP22-201ENST00000603788 447 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 ELOCP34-201ENST00000604436 327 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC009779.8-202ENST00000607990 932 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AC005858.3-201ENST00000624756 589 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 FRG1DP-201ENST00000635586 771 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CASC19-212ENST00000641153 1287 ntBASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC090771.1-201ENST00000585803 1618 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RNU6-1011P-201ENST00000384668 107 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC121334.1-201ENST00000396414 802 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 SNORA11.5-201ENST00000408163 128 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AL049610.1-201ENST00000423374 372 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 VN1R42P-201ENST00000424651 344 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 TXNP2-201ENST00000443918 295 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms