Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC016739.1-201ENST00000405359 345 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 RPL6P21-201ENST00000418672 846 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 RPS12P17-201ENST00000438591 377 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AMYP1-201ENST00000440059 1023 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 GEMIN2P1-201ENST00000454246 752 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC011853.1-201ENST00000518911 454 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC090424.1-201ENST00000535243 736 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC007956.1-201ENST00000555623 542 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 GARSP1-201ENST00000570895 719 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 MIR6809-201ENST00000612189 116 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 MIR7109-201ENST00000613748 65 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AL139099.4-201ENST00000614802 114 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 AC239868.2-201ENST00000564237 4527 ntBASIC6.55□□□□□ -1.36
CCDC65Q8IXS2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 RNFT1P3-201ENST00000340898 1052 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 RNU11-201ENST00000387069 134 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 CTSLP6-201ENST00000458273 1002 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 ASNSP4-201ENST00000511103 447 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 SCARNA18.1-201ENST00000516330 83 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 Vault.2-201ENST00000516519 98 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 HNRNPCP1-201ENST00000556181 766 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 AL360012.1-201ENST00000602813 131 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 AC108673.3-201ENST00000609183 335 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 LYARP1-201ENST00000436977 1501 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 AL121839.2-201ENST00000565058 6943 ntBASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC65Q8IXS2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 PARP4P2-201ENST00000446672 3326 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 MRPS21P2-201ENST00000424704 264 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC096775.1-201ENST00000437724 448 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC023141.8-201ENST00000442554 208 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 CYCSP51-201ENST00000443545 318 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 RNU1-88P-201ENST00000459274 128 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 LSM3P4-201ENST00000502948 309 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms