Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 AP001823.1-201ENST00000604056 1003 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 AL021368.3-201ENST00000607119 578 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 Z95327.3-201ENST00000610385 572 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 MIR6806-201ENST00000622141 64 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 AC018659.2-201ENST00000624690 715 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 AP001052.1-201ENST00000626421 99 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NUP54Q7Z3B4 AC123769.1-201ENST00000530992 3192 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC024651.2-201ENST00000562480 2098 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR10AB1P-202ENST00000641219 1686 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 MIR365B-201ENST00000362317 111 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 RNA5SP232-201ENST00000364144 119 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AL360271.1-201ENST00000395679 510 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 MTND4LP17-201ENST00000414607 293 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 GAPDHP59-201ENST00000435908 267 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 RPL5P7-201ENST00000444235 813 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AL590004.3-202ENST00000445883 451 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 RAB28P3-201ENST00000448325 597 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 HMGN1P8-201ENST00000463578 288 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 RN7SL221P-201ENST00000466190 281 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC021006.1-201ENST00000489849 553 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR9N1P-201ENST00000491296 333 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 SNX18P24-201ENST00000505249 671 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC018797.1-201ENST00000510791 255 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 MAST4-IT1-201ENST00000514241 658 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 OR4A40P-201ENST00000533878 948 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC090651.1-201ENST00000567865 634 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 MIR3189-201ENST00000578735 73 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 NPIPB1P-202ENST00000588786 828 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC091167.5-201ENST00000605689 894 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC016911.1-201ENST00000613297 452 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AC116667.2-201ENST00000641075 823 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 AL353796.1-201ENST00000561542 3241 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 CCNT2P1-201ENST00000423082 1315 ntBASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP54Q7Z3B4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC092070.2-203ENST00000598377 3644 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms