Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AL121873.1-201ENST00000616013 524 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC090617.9-201ENST00000623751 147 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC099667.1-201ENST00000624222 469 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 RPSAP68-201ENST00000625020 438 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 RNU6-236P-201ENST00000363886 106 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 MIR1277-201ENST00000408536 78 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 RN7SKP166-201ENST00000410812 305 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 LARP1BP3-201ENST00000437229 869 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 ARMC4P1-201ENST00000438905 707 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PTGES3P1-201ENST00000439531 483 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 MTCO3P18-201ENST00000440206 761 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 THAP12P8-201ENST00000447914 2115 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 NANOGNBP1-201ENST00000448444 480 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC010878.1-201ENST00000456500 1047 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PSMA6P2-201ENST00000457574 686 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 TPT1P7-201ENST00000458300 517 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC104339.1-201ENST00000465478 348 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC026336.1-201ENST00000466577 351 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC099340.1-201ENST00000475247 599 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 RN7SL88P-201ENST00000480166 299 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 RPL23AP44-201ENST00000482216 473 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 NIPA2P2-201ENST00000496376 1083 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 RN7SKP244-201ENST00000516513 307 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC005363.1-201ENST00000530779 351 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 OR1E3-201ENST00000575608 948 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AL078623.1-201ENST00000602702 907 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC011891.2-201ENST00000604949 397 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC004948.1-201ENST00000609858 672 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 AC009237.15-201ENST00000610252 501 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 MAPK10-357ENST00000641831 2858 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 THAP12P7-201ENST00000520248 2290 ntBASIC8.91□□□□□ -0.98
RC3H1Q5TC82 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
RC3H1Q5TC82 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms