Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC073046.2-201ENST00000604756 527 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL390877.1-201ENST00000605704 214 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC080188.3-201ENST00000624842 748 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 GUCY1B2-204ENST00000531898 1979 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC38Q502W7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 CASC19-260ENST00000641828 2001 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC38Q502W7 PPBPP2-201ENST00000513150 1362 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 RPL31P11-201ENST00000426558 1558 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 RN7SKP129-201ENST00000410288 299 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC092651.1-201ENST00000426110 312 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 GTF3AP6-201ENST00000432585 986 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC234771.4-201ENST00000441416 730 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 RPL7L1P3-201ENST00000455249 689 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AL445687.2-201ENST00000458156 728 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 PSMA2P2-201ENST00000504319 686 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC018645.1-201ENST00000505003 109 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC113191.1-201ENST00000517759 403 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AL133399.1-201ENST00000527476 298 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 TPRX1P1-201ENST00000557620 319 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AP004372.1-201ENST00000604842 844 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 RPL12P48-201ENST00000605620 304 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 OR8G7P-201ENST00000616658 848 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 CLUHP10-201ENST00000631979 980 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC116667.2-201ENST00000641075 823 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 AL353743.3-201ENST00000442109 1468 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 AC092451.3-201ENST00000625067 1343 ntBASIC6.44□□□□□ -1.38
CCDC38Q502W7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC38Q502W7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC38Q502W7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC125238.2-201ENST00000430003 1440 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 SNORD115-48-201ENST00000364764 76 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL121977.1-201ENST00000401636 979 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 UBTFL2-201ENST00000411859 1191 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL157884.1-201ENST00000424561 454 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 GTF2IP14-201ENST00000441415 586 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 GAPDHP37-201ENST00000442317 968 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 RPSAP39-201ENST00000467439 883 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 RN7SL413P-201ENST00000482700 297 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms