Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 CASC19-206ENST00000641028 1430 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 PDZK1P1-202ENST00000425209 1350 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 MTND4P29-201ENST00000503122 1372 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PCDH1Q08174 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AL121657.1-201ENST00000327215 531 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 RNU6-797P-201ENST00000363101 109 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 RNA5SP448-201ENST00000363151 111 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 RNA5SP218-201ENST00000363188 109 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 ATP5HP3-201ENST00000396994 486 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC244452.1-201ENST00000413798 141 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC009237.9-201ENST00000414800 347 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 FNDC3CP-201ENST00000420795 1155 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 GAPDHP73-201ENST00000423411 1007 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 MTND1P2-201ENST00000430604 821 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC122718.1-201ENST00000439448 744 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 CNOT7P2-201ENST00000441051 832 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AL451074.4-201ENST00000447545 470 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 FGF7P6-202ENST00000451282 293 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDH1Q08174 SNRPGP9-201ENST00000456025 225 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 RPS27AP2-201ENST00000457576 465 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 FAM133DP-201ENST00000464802 691 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 OR11I1P-201ENST00000486033 954 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC146944.3-201ENST00000509969 371 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC006499.4-201ENST00000510947 694 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 IGLVI-42-201ENST00000522485 381 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDH1Q08174 SMARCE1P4-201ENST00000523647 241 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC006120.1-201ENST00000579375 546 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AP002884.5-201ENST00000595053 1132 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC091946.2-201ENST00000606105 291 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC243830.2-201ENST00000618067 630 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AC135068.5-201ENST00000624197 983 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC087821.2-201ENST00000637086 450 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 AL589993.1-201ENST00000407450 2524 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDH1Q08174 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 AC092821.2-201ENST00000545710 2042 ntBASIC7.1□□□□□ -1.27
PCDH1Q08174 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.09□□□□□ -1.27
PCDH1Q08174 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDH1Q08174 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDH1Q08174 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms