Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.65□□□□□ -1.5
LTBQ06643 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 GAPDHP48-201ENST00000436626 961 ntBASIC5.65□□□□□ -1.5
LTBQ06643 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.65□□□□□ -1.5
LTBQ06643 RPL5P7-201ENST00000444235 813 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC073594.1-201ENST00000462065 364 ntBASIC5.65□□□□□ -1.5
LTBQ06643 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.65□□□□□ -1.5
LTBQ06643 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.65□□□□□ -1.5
LTBQ06643 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LTBQ06643 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.65□□□□□ -1.5
LTBQ06643 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.65□□□□□ -1.5
LTBQ06643 MTND5P21-201ENST00000531961 522 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.65□□□□□ -1.5
LTBQ06643 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.65□□□□□ -1.5
LTBQ06643 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.65□□□□□ -1.5
LTBQ06643 AC007494.1-201ENST00000562293 760 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 AC016180.1-201ENST00000567945 403 ntBASIC5.65□□□□□ -1.5
LTBQ06643 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.65□□□□□ -1.5
LTBQ06643 AC068313.1-201ENST00000604028 1008 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AL713998.2-201ENST00000604538 1198 ntBASIC5.65□□□□□ -1.5
LTBQ06643 BNIP3P19-201ENST00000605397 577 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC018754.1-201ENST00000607486 925 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AL391834.2-201ENST00000609982 546 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AL136295.6-201ENST00000610486 658 ntBASIC5.65□□□□□ -1.5
LTBQ06643 WBP1LP8-201ENST00000617401 327 ntBASIC5.65□□□□□ -1.5
LTBQ06643 MIR6826-201ENST00000617808 98 ntBASIC5.65□□□□□ -1.5
LTBQ06643 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.65□□□□□ -1.5
LTBQ06643 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
LTBQ06643 AL136520.1-201ENST00000600311 1322 ntBASIC5.65□□□□□ -1.51
LTBQ06643 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
LTBQ06643 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.65□□□□□ -1.51
LTBQ06643 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.65□□□□□ -1.51
LTBQ06643 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
LTBQ06643 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.65□□□□□ -1.51
LTBQ06643 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LTBQ06643 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.64□□□□□ -1.51
LTBQ06643 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.64□□□□□ -1.51
LTBQ06643 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LTBQ06643 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LTBQ06643 MIR937-201ENST00000401271 86 ntBASIC5.64□□□□□ -1.51
LTBQ06643 RNA5SP198-201ENST00000410376 127 ntBASIC5.64□□□□□ -1.51
LTBQ06643 RN7SKP278-201ENST00000410504 342 ntBASIC5.64□□□□□ -1.51
LTBQ06643 HMGA1P8-201ENST00000414130 321 ntBASIC5.64□□□□□ -1.51
LTBQ06643 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 RPL34P27-201ENST00000428810 349 ntBASIC5.64□□□□□ -1.51
LTBQ06643 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.64□□□□□ -1.51
LTBQ06643 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 SEPT14P12-201ENST00000442280 560 ntBASIC5.64□□□□□ -1.51
LTBQ06643 AC073109.1-201ENST00000445066 978 ntBASIC5.64□□□□□ -1.51
LTBQ06643 RANP2-201ENST00000456833 229 ntBASIC5.64□□□□□ -1.51
LTBQ06643 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 PPIAP19-201ENST00000486414 492 ntBASIC5.64□□□□□ -1.51
LTBQ06643 AC119751.4-201ENST00000507498 357 ntBASIC5.64□□□□□ -1.51
LTBQ06643 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.64□□□□□ -1.51
LTBQ06643 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 DNAJC19P3-201ENST00000594491 331 ntBASIC5.64□□□□□ -1.51
LTBQ06643 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.64□□□□□ -1.51
LTBQ06643 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 AL591167.1-201ENST00000607321 456 ntBASIC5.64□□□□□ -1.51
LTBQ06643 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.64□□□□□ -1.51
LTBQ06643 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.64□□□□□ -1.51
LTBQ06643 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LTBQ06643 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LTBQ06643 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms