Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 OR11I1P-201ENST00000486033 954 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 OR7E157P-201ENST00000494376 911 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 RN7SKP21-201ENST00000516503 220 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 AL590392.1-201ENST00000604960 446 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AL645933.2-201ENST00000606743 1207 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC132068.1-201ENST00000623805 459 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 Z97989.1-201ENST00000531702 2421 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 AL139384.2-201ENST00000613809 3590 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CACNA1BQ00975 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 AL050305.1-201ENST00000399993 1230 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC008280.1-201ENST00000418851 412 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 CDC27P1-201ENST00000445384 715 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AL445466.1-201ENST00000448432 357 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 SNRPCP2-201ENST00000504370 475 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 AC087385.3-201ENST00000620477 187 ntBASIC5.59□□□□□ -1.51
CACNA1BQ00975 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
CACNA1BQ00975 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.59□□□□□ -1.52
CACNA1BQ00975 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CACNA1BQ00975 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.59□□□□□ -1.52
CACNA1BQ00975 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
CACNA1BQ00975 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CACNA1BQ00975 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CACNA1BQ00975 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CACNA1BQ00975 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CACNA1BQ00975 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CACNA1BQ00975 AC093278.2-201ENST00000564956 2485 ntBASIC5.59□□□□□ -1.52
CACNA1BQ00975 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AL590762.1-201ENST00000391782 432 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 RBBP4P4-201ENST00000398588 1289 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 RSL24D1P6-201ENST00000426934 401 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AL359073.1-201ENST00000448036 403 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 PTTG3P-201ENST00000521862 606 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC011453.2-201ENST00000603737 729 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 CYP4F35P-202ENST00000636121 390 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AL023806.3-201ENST00000638502 2704 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC009962.1-201ENST00000567327 3813 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AL034417.4-202ENST00000642135 2236 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 RNA5SP387-201ENST00000364226 106 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC016739.1-201ENST00000405359 345 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 GABARAPL3-201ENST00000412799 354 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 MTND6P1-201ENST00000417434 424 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC130456.6-201ENST00000623745 765 ntBASIC5.58□□□□□ -1.52
CACNA1BQ00975 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC5.58□□□□□ -1.52
CACNA1BQ00975 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CACNA1BQ00975 AC009948.3-201ENST00000603415 1798 ntBASIC5.57□□□□□ -1.52
CACNA1BQ00975 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms