Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR133A2-201ENST00000347538 102 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC016739.1-201ENST00000405359 345 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC017078.1-201ENST00000416146 368 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC068491.1-201ENST00000449539 1241 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC090602.1-201ENST00000469695 252 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 ST13P12-201ENST00000508958 1094 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AL845552.1-201ENST00000556820 323 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC091078.2-201ENST00000557145 559 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC026826.3-201ENST00000561747 158 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 TXNP4-201ENST00000575018 310 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC090236.2-201ENST00000587933 1101 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AL591926.1-201ENST00000620542 217 ntBASIC5.15□□□□□ -1.59
HIST1H3AP68431 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
HIST1H3AP68431 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HIST1H3AP68431 AC093225.1-201ENST00000506867 1408 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AL158152.1-201ENST00000602652 1435 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 RNFT1P3-201ENST00000340898 1052 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 RN7SKP78-201ENST00000364711 318 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 MIR1275-201ENST00000408770 80 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 VN1R110P-201ENST00000438988 971 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 EEF1B2P3-201ENST00000447718 678 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 PPIAP27-201ENST00000453800 265 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC005165.2-201ENST00000466070 380 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC006539.1-201ENST00000481419 501 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 RBBP4P1-201ENST00000502424 1276 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC026782.2-201ENST00000510845 636 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 RN7SKP183-201ENST00000517169 324 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 MIR3154-201ENST00000577829 84 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC023389.2-201ENST00000580031 955 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC060780.2-201ENST00000589047 198 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AL133481.2-203ENST00000607558 139 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 AL021918.2-201ENST00000613415 194 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 AL139099.4-201ENST00000614802 114 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 SAMM50P1-201ENST00000455403 1399 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HIST1H3AP68431 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.14□□□□□ -1.59
HIST1H3AP68431 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HIST1H3AP68431 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
HIST1H3AP68431 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
HIST1H3AP68431 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
HIST1H3AP68431 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms