Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RHBDL3P58872 RPL31P15-201ENST00000449770 338 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 MTND2P3-201ENST00000452458 470 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 TPRKBP1-201ENST00000456243 481 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 AC091544.1-201ENST00000484702 348 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.24□□□□□ -1.25
RHBDL3P58872 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.24□□□□□ -1.25
RHBDL3P58872 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RHBDL3P58872 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.24□□□□□ -1.25
RHBDL3P58872 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.24□□□□□ -1.25
RHBDL3P58872 AC016839.1-201ENST00000578162 867 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 MIR4776-2-201ENST00000580204 80 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.24□□□□□ -1.25
RHBDL3P58872 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RHBDL3P58872 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.24□□□□□ -1.25
RHBDL3P58872 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.24□□□□□ -1.25
RHBDL3P58872 AC073111.2-201ENST00000605657 1075 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.24□□□□□ -1.25
RHBDL3P58872 AL021368.3-201ENST00000607119 578 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 AL354696.1-201ENST00000614652 497 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RHBDL3P58872 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RHBDL3P58872 AL591848.4-201ENST00000567832 3472 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.24□□□□□ -1.25
RHBDL3P58872 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
RHBDL3P58872 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RHBDL3P58872 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RHBDL3P58872 AP001284.1-201ENST00000528393 2118 ntBASIC7.24□□□□□ -1.25
RHBDL3P58872 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
RHBDL3P58872 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC027088.4-201ENST00000611559 1947 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RHBDL3P58872 RNA5SP105-201ENST00000391123 113 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 RPL10P10-201ENST00000403509 664 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 EEF1B2P8-201ENST00000414101 671 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC106901.1-201ENST00000425086 698 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.23□□□□□ -1.25
RHBDL3P58872 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 AL022237.1-201ENST00000446663 358 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 NXT1P1-201ENST00000458481 316 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 HESX1-202ENST00000473921 757 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 RNU6-491P-201ENST00000516099 110 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC027544.3-201ENST00000535082 757 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AL356801.1-201ENST00000559320 294 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC007342.5-201ENST00000571340 2142 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC011445.2-201ENST00000599274 173 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 RMST_5.1-201ENST00000618704 126 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.23□□□□□ -1.25
RHBDL3P58872 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC003992.1-201ENST00000635364 557 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 MIR4302-201ENST00000638058 60 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.23□□□□□ -1.25
RHBDL3P58872 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC011369.2-201ENST00000624423 1567 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 AL359091.1-201ENST00000449048 1734 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RHBDL3P58872 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RHBDL3P58872 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 AC107021.2-201ENST00000567714 2095 ntBASIC7.23□□□□□ -1.25
RHBDL3P58872 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RHBDL3P58872 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC012254.3-201ENST00000591183 2117 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.22□□□□□ -1.25
RHBDL3P58872 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AP000432.2-201ENST00000624164 2048 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.22□□□□□ -1.25
RHBDL3P58872 RNA5SP500-201ENST00000364486 119 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms