Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.51□□□□□ -1.37
VCPP55072 SLC25A51P1-201ENST00000468432 871 ntBASIC6.51□□□□□ -1.37
VCPP55072 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 OR5M14P-201ENST00000506803 618 ntBASIC6.51□□□□□ -1.37
VCPP55072 RNA5SP400-201ENST00000517155 111 ntBASIC6.51□□□□□ -1.37
VCPP55072 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.51□□□□□ -1.37
VCPP55072 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.51□□□□□ -1.37
VCPP55072 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.51□□□□□ -1.37
VCPP55072 AC079600.1-201ENST00000550326 297 ntBASIC6.51□□□□□ -1.37
VCPP55072 AC022404.1-201ENST00000555320 273 ntBASIC6.51□□□□□ -1.37
VCPP55072 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 AC027229.1-201ENST00000583887 253 ntBASIC6.51□□□□□ -1.37
VCPP55072 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.51□□□□□ -1.37
VCPP55072 AC244517.3-201ENST00000616254 1235 ntBASIC6.51□□□□□ -1.37
VCPP55072 RFPL4AP6-201ENST00000616792 846 ntBASIC6.51□□□□□ -1.37
VCPP55072 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 AC116667.2-201ENST00000641075 823 ntBASIC6.51□□□□□ -1.37
VCPP55072 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 AC120036.2-201ENST00000509729 1474 ntBASIC6.51□□□□□ -1.37
VCPP55072 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VCPP55072 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.5□□□□□ -1.37
VCPP55072 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VCPP55072 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.5□□□□□ -1.37
VCPP55072 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.5□□□□□ -1.37
VCPP55072 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VCPP55072 RPS3AP2-201ENST00000407190 754 ntBASIC6.5□□□□□ -1.37
VCPP55072 RN7SKP121-201ENST00000410842 305 ntBASIC6.5□□□□□ -1.37
VCPP55072 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.5□□□□□ -1.37
VCPP55072 BX119321.1-201ENST00000428912 797 ntBASIC6.5□□□□□ -1.37
VCPP55072 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.5□□□□□ -1.37
VCPP55072 CFL1P4-201ENST00000451536 498 ntBASIC6.5□□□□□ -1.37
VCPP55072 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.5□□□□□ -1.37
VCPP55072 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.5□□□□□ -1.37
VCPP55072 NDUFB5P1-201ENST00000508134 564 ntBASIC6.5□□□□□ -1.37
VCPP55072 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.5□□□□□ -1.37
VCPP55072 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.5□□□□□ -1.37
VCPP55072 AC027026.1-201ENST00000532323 742 ntBASIC6.5□□□□□ -1.37
VCPP55072 OR4A6P-201ENST00000534364 970 ntBASIC6.5□□□□□ -1.37
VCPP55072 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.5□□□□□ -1.37
VCPP55072 RPA2P1-201ENST00000556557 721 ntBASIC6.5□□□□□ -1.37
VCPP55072 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.5□□□□□ -1.37
VCPP55072 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.5□□□□□ -1.37
VCPP55072 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.5□□□□□ -1.37
VCPP55072 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.5□□□□□ -1.37
VCPP55072 AC108673.3-201ENST00000609183 335 ntBASIC6.5□□□□□ -1.37
VCPP55072 AC006924.1-201ENST00000610750 559 ntBASIC6.5□□□□□ -1.37
VCPP55072 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.5□□□□□ -1.37
VCPP55072 MIR7159-201ENST00000620587 66 ntBASIC6.5□□□□□ -1.37
VCPP55072 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.5□□□□□ -1.37
VCPP55072 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.5□□□□□ -1.37
VCPP55072 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
VCPP55072 AC079753.1-201ENST00000623243 3868 ntBASIC6.5□□□□□ -1.37
VCPP55072 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 AL162456.1-201ENST00000634535 2006 ntBASIC6.5□□□□□ -1.37
VCPP55072 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VCPP55072 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.5□□□□□ -1.37
VCPP55072 AC109780.1-201ENST00000451768 1344 ntBASIC6.5□□□□□ -1.37
VCPP55072 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VCPP55072 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VCPP55072 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 AL132656.3-201ENST00000606384 1595 ntBASIC6.49□□□□□ -1.37
VCPP55072 HDAC1P2-201ENST00000453661 1398 ntBASIC6.49□□□□□ -1.37
VCPP55072 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 AP001541.1-201ENST00000623322 1904 ntBASIC6.49□□□□□ -1.37
VCPP55072 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 AL445238.1-204ENST00000400311 463 ntBASIC6.49□□□□□ -1.37
VCPP55072 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms