Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 AC020549.1-201ENST00000536916 1440 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC061975.5-201ENST00000584928 1441 ntBASIC9.43□□□□□ -0.9
ATN1P54259 RN7SKP95-201ENST00000362860 303 ntBASIC9.43□□□□□ -0.9
ATN1P54259 RNU6-1120P-201ENST00000362988 108 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC245036.1-201ENST00000391727 309 ntBASIC9.43□□□□□ -0.9
ATN1P54259 MIR1252-201ENST00000408861 65 ntBASIC9.43□□□□□ -0.9
ATN1P54259 RN7SKP85-201ENST00000411349 318 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 AP000534.2-201ENST00000412729 568 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AC080125.1-201ENST00000414888 684 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC109638.1-201ENST00000417406 326 ntBASIC9.43□□□□□ -0.9
ATN1P54259 NPM1P34-201ENST00000428821 893 ntBASIC9.43□□□□□ -0.9
ATN1P54259 RPS6P12-201ENST00000432491 726 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AC092809.1-201ENST00000441469 474 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC015983.1-201ENST00000441577 373 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AL590664.1-201ENST00000448065 339 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AC002553.2-201ENST00000453217 340 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AL606490.6-201ENST00000453735 523 ntBASIC9.43□□□□□ -0.9
ATN1P54259 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 RNU6-1132P-201ENST00000459214 107 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC090589.1-201ENST00000473109 362 ntBASIC9.43□□□□□ -0.9
ATN1P54259 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC9.43□□□□□ -0.9
ATN1P54259 TAAR3P-202ENST00000481759 1025 ntBASIC9.43□□□□□ -0.9
ATN1P54259 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 AC006390.1-201ENST00000508068 283 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 RPL7L1P13-201ENST00000511702 739 ntBASIC9.43□□□□□ -0.9
ATN1P54259 RNU6-1023P-201ENST00000516137 106 ntBASIC9.43□□□□□ -0.9
ATN1P54259 RNY4P37-201ENST00000516225 96 ntBASIC9.43□□□□□ -0.9
ATN1P54259 Y_RNA.700-201ENST00000516806 100 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AP002812.4-201ENST00000532139 286 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 NF1P12-201ENST00000549593 583 ntBASIC9.43□□□□□ -0.9
ATN1P54259 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC9.43□□□□□ -0.9
ATN1P54259 AL683813.2-201ENST00000605245 502 ntBASIC9.43□□□□□ -0.9
ATN1P54259 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 AC132825.8-201ENST00000640783 297 ntBASIC9.43□□□□□ -0.9
ATN1P54259 OR2L1P-202ENST00000641567 1023 ntBASIC9.43□□□□□ -0.9
ATN1P54259 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC9.43□□□□□ -0.9
ATN1P54259 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
ATN1P54259 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
ATN1P54259 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
ATN1P54259 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC9.42□□□□□ -0.9
ATN1P54259 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC9.42□□□□□ -0.9
ATN1P54259 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.42□□□□□ -0.9
ATN1P54259 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC9.42□□□□□ -0.9
ATN1P54259 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ATN1P54259 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
ATN1P54259 RNU6-1115P-201ENST00000362490 106 ntBASIC9.42□□□□□ -0.9
ATN1P54259 RN7SKP1-201ENST00000365525 307 ntBASIC9.42□□□□□ -0.9
ATN1P54259 RNU6-1027P-201ENST00000383998 107 ntBASIC9.42□□□□□ -0.9
ATN1P54259 RNU6-31P-201ENST00000384388 108 ntBASIC9.42□□□□□ -0.9
ATN1P54259 RNU6-1263P-201ENST00000384601 106 ntBASIC9.42□□□□□ -0.9
ATN1P54259 AL360271.1-201ENST00000395679 510 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms