Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRGP48443 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRGP48443 AC083906.1-201ENST00000509298 406 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AC095052.1-201ENST00000509955 863 ntBASIC6.32□□□□□ -1.4
RXRGP48443 HMGB1P47-201ENST00000511281 589 ntBASIC6.32□□□□□ -1.4
RXRGP48443 RNU6-760P-201ENST00000516078 97 ntBASIC6.32□□□□□ -1.4
RXRGP48443 IGHV3-57-201ENST00000520143 280 ntBASIC6.32□□□□□ -1.4
RXRGP48443 IGHV4-55-201ENST00000520889 368 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 IGHV1-14-201ENST00000523391 241 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.32□□□□□ -1.4
RXRGP48443 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 NANOGNBP2-201ENST00000544753 553 ntBASIC6.32□□□□□ -1.4
RXRGP48443 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRGP48443 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRGP48443 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 TPRX1P1-201ENST00000557620 319 ntBASIC6.32□□□□□ -1.4
RXRGP48443 FAM106CP-201ENST00000582212 507 ntBASIC6.32□□□□□ -1.4
RXRGP48443 MIR4420-201ENST00000583944 77 ntBASIC6.32□□□□□ -1.4
RXRGP48443 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRGP48443 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRGP48443 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRGP48443 AC073111.2-201ENST00000605657 1075 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AL451049.1-201ENST00000608672 497 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRGP48443 AC004241.3-201ENST00000611728 517 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AC005393.1-201ENST00000617916 584 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRGP48443 AL354718.1-201ENST00000619764 589 ntBASIC6.32□□□□□ -1.4
RXRGP48443 AL118508.4-201ENST00000624142 1176 ntBASIC6.32□□□□□ -1.4
RXRGP48443 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 AC092070.2-203ENST00000598377 3644 ntBASIC6.32□□□□□ -1.4
RXRGP48443 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.32□□□□□ -1.4
RXRGP48443 AC125238.2-201ENST00000430003 1440 ntBASIC6.32□□□□□ -1.4
RXRGP48443 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RXRGP48443 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RXRGP48443 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRGP48443 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 AL034546.1-201ENST00000623740 3693 ntBASIC6.31□□□□□ -1.4
RXRGP48443 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RXRGP48443 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RXRGP48443 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RXRGP48443 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRGP48443 AMZ2P2-201ENST00000406819 1057 ntBASIC6.31□□□□□ -1.4
RXRGP48443 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRGP48443 AL356806.1-201ENST00000422524 916 ntBASIC6.31□□□□□ -1.4
RXRGP48443 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.31□□□□□ -1.4
RXRGP48443 TRIM60P13-201ENST00000432350 1283 ntBASIC6.31□□□□□ -1.4
RXRGP48443 RPL6P30-201ENST00000443382 862 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRGP48443 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RXRGP48443 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRGP48443 RPSAP39-201ENST00000467439 883 ntBASIC6.31□□□□□ -1.4
RXRGP48443 HAUS1P1-201ENST00000505275 832 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRGP48443 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRGP48443 ACTR6P1-201ENST00000514311 1104 ntBASIC6.31□□□□□ -1.4
RXRGP48443 RNA5SP206-201ENST00000516703 121 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC109635.6-201ENST00000525487 1113 ntBASIC6.31□□□□□ -1.4
RXRGP48443 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRGP48443 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRGP48443 AC125494.2-201ENST00000602431 657 ntBASIC6.31□□□□□ -1.4
RXRGP48443 BMS1P7-201ENST00000602440 1052 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC067773.1-201ENST00000603284 1094 ntBASIC6.31□□□□□ -1.4
RXRGP48443 BUB1P1-201ENST00000603541 607 ntBASIC6.31□□□□□ -1.4
RXRGP48443 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 MIR6862-1-201ENST00000613016 70 ntBASIC6.31□□□□□ -1.4
RXRGP48443 MIR6862-2-201ENST00000614755 70 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 AP001264.1-201ENST00000620602 703 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC012653.2-201ENST00000621880 420 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC004836.1-201ENST00000623032 634 ntBASIC6.31□□□□□ -1.4
RXRGP48443 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRGP48443 AC073869.7-201ENST00000640874 297 ntBASIC6.31□□□□□ -1.4
RXRGP48443 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RXRGP48443 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRGP48443 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RXRGP48443 AC087516.1-201ENST00000561236 2428 ntBASIC6.31□□□□□ -1.4
RXRGP48443 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms