Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CLIP1P30622 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CLIP1P30622 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CLIP1P30622 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CLIP1P30622 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CLIP1P30622 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CLIP1P30622 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CLIP1P30622 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC9.16□□□□□ -0.94
CLIP1P30622 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC9.16□□□□□ -0.94
CLIP1P30622 RPS3AP38-201ENST00000435889 763 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC9.16□□□□□ -0.94
CLIP1P30622 AC126615.2-201ENST00000553003 515 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.16□□□□□ -0.94
CLIP1P30622 DPPA3P2-202ENST00000557188 1219 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.16□□□□□ -0.94
CLIP1P30622 HCG18-243ENST00000602498 327 ntTSL 3 BASIC9.16□□□□□ -0.94
CLIP1P30622 AL035661.1-201ENST00000620459 1144 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 AC004808.2-201ENST00000627965 773 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CLIP1P30622 YES1P1-201ENST00000418510 1628 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC9.16□□□□□ -0.94
CLIP1P30622 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CLIP1P30622 AC022164.1-201ENST00000568767 2673 ntBASIC9.16□□□□□ -0.94
CLIP1P30622 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CLIP1P30622 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC9.16□□□□□ -0.94
CLIP1P30622 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CLIP1P30622 AC241584.2-201ENST00000637142 2090 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
CLIP1P30622 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9.15□□□□□ -0.94
CLIP1P30622 SPRYD7P1-201ENST00000443861 570 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 AC008410.1-201ENST00000483777 339 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.15□□□□□ -0.94
CLIP1P30622 AC021678.3-201ENST00000517893 476 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC9.15□□□□□ -0.94
CLIP1P30622 AC006115.2-201ENST00000596823 202 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 AC079776.5-201ENST00000641920 211 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 ZNF101P1-201ENST00000435701 1720 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 AC009779.8-201ENST00000641684 4384 ntBASIC9.15□□□□□ -0.94
CLIP1P30622 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CLIP1P30622 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CLIP1P30622 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
CLIP1P30622 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.15□□□□□ -0.94
CLIP1P30622 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
CLIP1P30622 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CLIP1P30622 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC9.15□□□□□ -0.94
CLIP1P30622 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.15□□□□□ -0.94
CLIP1P30622 AL662795.2-201ENST00000624252 3706 ntBASIC9.15□□□□□ -0.95
CLIP1P30622 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CLIP1P30622 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CLIP1P30622 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CLIP1P30622 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CLIP1P30622 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CLIP1P30622 RNU1-59P-201ENST00000364829 162 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 AL121977.1-201ENST00000401636 979 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC9.14□□□□□ -0.95
CLIP1P30622 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC9.14□□□□□ -0.95
CLIP1P30622 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC9.14□□□□□ -0.95
CLIP1P30622 AC006335.2-201ENST00000437993 330 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC9.14□□□□□ -0.95
CLIP1P30622 CYCSP51-201ENST00000443545 318 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 AC007386.1-201ENST00000455212 582 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CLIP1P30622 MINCR-206ENST00000524335 499 ntTSL 2 BASIC9.14□□□□□ -0.95
CLIP1P30622 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC9.14□□□□□ -0.95
CLIP1P30622 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC9.14□□□□□ -0.95
CLIP1P30622 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC9.14□□□□□ -0.95
CLIP1P30622 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CLIP1P30622 PPATP2-201ENST00000605635 508 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC9.14□□□□□ -0.95
CLIP1P30622 U1.25-201ENST00000614085 162 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 U1.34-201ENST00000618578 162 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 U1.31-201ENST00000620022 160 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.14□□□□□ -0.95
CLIP1P30622 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CLIP1P30622 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CLIP1P30622 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC9.14□□□□□ -0.95
CLIP1P30622 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CLIP1P30622 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CLIP1P30622 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CLIP1P30622 SNORD1C-201ENST00000363315 78 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.14□□□□□ -0.95
CLIP1P30622 OR6E1P-201ENST00000414424 923 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC9.14□□□□□ -0.95
CLIP1P30622 AC005297.1-201ENST00000444765 862 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 OSTCP1-201ENST00000455507 450 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 AC006499.3-201ENST00000506077 748 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 AC074255.1-201ENST00000511259 501 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 IGLV2-28-201ENST00000520681 304 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC9.14□□□□□ -0.95
CLIP1P30622 AC211433.2-201ENST00000608433 387 ntBASIC9.14□□□□□ -0.95
CLIP1P30622 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CLIP1P30622 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC9.13□□□□□ -0.95
CLIP1P30622 AC005225.5-201ENST00000623547 2225 ntBASIC9.13□□□□□ -0.95
CLIP1P30622 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
CLIP1P30622 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC9.13□□□□□ -0.95
CLIP1P30622 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CLIP1P30622 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms