Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RPL6P30-201ENST00000443382 862 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 RAB9AP2-201ENST00000443911 597 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC009963.3-201ENST00000458090 486 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC104164.1-201ENST00000460282 590 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AP002884.1-201ENST00000479691 655 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC012123.2-201ENST00000485809 248 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 RN7SKP67-201ENST00000515905 235 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 SNORD116-30-201ENST00000516468 85 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC009879.1-201ENST00000520029 839 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC110056.1-201ENST00000525759 911 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC006512.2-201ENST00000543250 486 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC068768.2-201ENST00000602352 343 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 MIR6071-201ENST00000616741 78 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 AC245100.2-201ENST00000454544 1679 ntBASIC6.06□□□□□ -1.44
HLA-DPA1P20036 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DPA1P20036 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC004656.1-201ENST00000568479 4951 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 SNORA51.9-201ENST00000384295 124 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 RNU4-64P-201ENST00000410795 131 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 RPS26P38-201ENST00000414476 348 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 RPL23AP18-201ENST00000416139 468 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 PNKDP1-201ENST00000435914 430 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 SDC4P-201ENST00000453285 601 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 ACA64.4-201ENST00000459070 127 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 BCAS2P1-201ENST00000528022 632 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 OR4A42P-201ENST00000531397 938 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AP005901.4-201ENST00000577336 569 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC067838.1-201ENST00000606064 577 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC004801.6-201ENST00000616571 978 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC073869.7-201ENST00000640874 297 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 AC008627.1-201ENST00000517511 1704 ntBASIC6.05□□□□□ -1.44
HLA-DPA1P20036 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DPA1P20036 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC012254.3-201ENST00000591183 2117 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 RNA5SP211-201ENST00000365516 117 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC007679.3-201ENST00000434035 414 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AL445466.1-201ENST00000448432 357 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC023245.1-201ENST00000468501 517 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms