Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL121768.1-201ENST00000613917 2544 ntBASIC5.98□□□□□ -1.45
PCNAP12004 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
PCNAP12004 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCNAP12004 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCNAP12004 AC144833.1-201ENST00000567953 4089 ntBASIC5.98□□□□□ -1.45
PCNAP12004 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.98□□□□□ -1.45
PCNAP12004 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCNAP12004 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCNAP12004 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCNAP12004 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.97□□□□□ -1.45
PCNAP12004 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 AL133243.2-201ENST00000610331 1621 ntBASIC5.97□□□□□ -1.45
PCNAP12004 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 RNU1-49P-201ENST00000363468 159 ntBASIC5.97□□□□□ -1.45
PCNAP12004 RNA5SP346-201ENST00000363541 121 ntBASIC5.97□□□□□ -1.45
PCNAP12004 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCNAP12004 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCNAP12004 PSMA6P1-201ENST00000400275 741 ntBASIC5.97□□□□□ -1.45
PCNAP12004 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 AJ239321.1-201ENST00000424255 564 ntBASIC5.97□□□□□ -1.45
PCNAP12004 CR848007.2-201ENST00000424918 787 ntBASIC5.97□□□□□ -1.45
PCNAP12004 EIF2S2P3-201ENST00000428356 999 ntBASIC5.97□□□□□ -1.45
PCNAP12004 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.97□□□□□ -1.45
PCNAP12004 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 MTND4P15-201ENST00000437913 1033 ntBASIC5.97□□□□□ -1.45
PCNAP12004 PPIAP10-201ENST00000438675 458 ntBASIC5.97□□□□□ -1.45
PCNAP12004 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.97□□□□□ -1.45
PCNAP12004 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.97□□□□□ -1.45
PCNAP12004 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 CYCSP53-201ENST00000455540 265 ntBASIC5.97□□□□□ -1.45
PCNAP12004 AC108751.3-201ENST00000461814 1020 ntBASIC5.97□□□□□ -1.45
PCNAP12004 AL355032.1-201ENST00000472981 438 ntBASIC5.97□□□□□ -1.45
PCNAP12004 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.97□□□□□ -1.45
PCNAP12004 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.97□□□□□ -1.45
PCNAP12004 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.97□□□□□ -1.45
PCNAP12004 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 AC012414.2-201ENST00000559474 187 ntBASIC5.97□□□□□ -1.45
PCNAP12004 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 MIR744-201ENST00000578242 98 ntBASIC5.97□□□□□ -1.45
PCNAP12004 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.97□□□□□ -1.45
PCNAP12004 AC005479.3-201ENST00000602790 431 ntBASIC5.97□□□□□ -1.45
PCNAP12004 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.97□□□□□ -1.45
PCNAP12004 MIR6823-201ENST00000622118 61 ntBASIC5.97□□□□□ -1.45
PCNAP12004 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
PCNAP12004 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCNAP12004 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.97□□□□□ -1.45
PCNAP12004 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.96□□□□□ -1.45
PCNAP12004 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCNAP12004 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.96□□□□□ -1.45
PCNAP12004 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.96□□□□□ -1.45
PCNAP12004 AC010266.2-201ENST00000564741 3255 ntBASIC5.96□□□□□ -1.45
PCNAP12004 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.96□□□□□ -1.45
PCNAP12004 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCNAP12004 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
PCNAP12004 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.96□□□□□ -1.45
PCNAP12004 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCNAP12004 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCNAP12004 MTND4P21-201ENST00000453886 1357 ntBASIC5.96□□□□□ -1.45
PCNAP12004 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCNAP12004 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCNAP12004 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCNAP12004 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 RN7SKP184-201ENST00000362348 333 ntBASIC5.96□□□□□ -1.46
PCNAP12004 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 AL133260.1-201ENST00000405720 405 ntBASIC5.96□□□□□ -1.46
PCNAP12004 RN7SKP144-201ENST00000411108 279 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AL445213.1-201ENST00000412589 747 ntBASIC5.96□□□□□ -1.46
PCNAP12004 RPS26P38-201ENST00000414476 348 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 AC094019.1-201ENST00000434678 472 ntBASIC5.96□□□□□ -1.46
PCNAP12004 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 LINC00328-2P-201ENST00000436585 219 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms