Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC10.73□□□□□ -0.69
MYCNP04198 MIR4703-201ENST00000577728 79 ntBASIC10.73□□□□□ -0.69
MYCNP04198 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC10.73□□□□□ -0.69
MYCNP04198 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC10.73□□□□□ -0.69
MYCNP04198 AC006557.5-201ENST00000603126 811 ntBASIC10.73□□□□□ -0.69
MYCNP04198 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC10.73□□□□□ -0.69
MYCNP04198 AC235565.1-201ENST00000456962 1325 ntBASIC10.73□□□□□ -0.69
MYCNP04198 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 EDA-213ENST00000616899 4643 ntTSL 5 BASIC10.73□□□□□ -0.69
MYCNP04198 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC10.73□□□□□ -0.69
MYCNP04198 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
MYCNP04198 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 LINC01654-201ENST00000569711 2471 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MYCNP04198 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 CEP112-203ENST00000535342 3392 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 PPP2R2B-205ENST00000394414 2262 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 BRCA1-219ENST00000491747 2379 ntTSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 AC069281.1-201ENST00000392471 570 ntTSL 4 BASIC10.72□□□□□ -0.69
MYCNP04198 RNU6-1050P-201ENST00000410388 107 ntBASIC10.72□□□□□ -0.69
MYCNP04198 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 AL451139.1-201ENST00000434718 346 ntBASIC10.72□□□□□ -0.69
MYCNP04198 TUBB4BP6-201ENST00000437576 479 ntBASIC10.72□□□□□ -0.69
MYCNP04198 AC246785.1-201ENST00000440916 264 ntBASIC10.72□□□□□ -0.69
MYCNP04198 RN7SL482P-201ENST00000487928 298 ntBASIC10.72□□□□□ -0.69
MYCNP04198 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 MTND6P17-201ENST00000511811 519 ntBASIC10.72□□□□□ -0.69
MYCNP04198 IGKV2D-10-201ENST00000520194 281 ntBASIC10.72□□□□□ -0.69
MYCNP04198 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC10.72□□□□□ -0.69
MYCNP04198 AC055716.1-201ENST00000550077 495 ntBASIC10.72□□□□□ -0.69
MYCNP04198 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 CYP4A26P-201ENST00000563017 196 ntBASIC10.72□□□□□ -0.69
MYCNP04198 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC10.72□□□□□ -0.69
MYCNP04198 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 MRO-208ENST00000588444 866 ntTSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 TEX26-AS1-216ENST00000592950 747 ntTSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 AC006254.3-201ENST00000603353 884 ntBASIC10.72□□□□□ -0.69
MYCNP04198 SNORD58B-201ENST00000607313 66 ntBASIC10.72□□□□□ -0.69
MYCNP04198 DLEU2_5.1-201ENST00000615567 84 ntBASIC10.72□□□□□ -0.69
MYCNP04198 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 SIAE-205ENST00000545756 2921 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 PRR23D2-201ENST00000528972 1587 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 PRR23D1-201ENST00000533250 1587 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 AL442639.1-201ENST00000625030 1899 ntBASIC10.72□□□□□ -0.69
MYCNP04198 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC10.72□□□□□ -0.69
MYCNP04198 SELP-206ENST00000458599 1945 ntTSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
MYCNP04198 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
MYCNP04198 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MYCNP04198 AC125603.4-201ENST00000621942 2699 ntBASIC10.71□□□□□ -0.69
MYCNP04198 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC10.71□□□□□ -0.69
MYCNP04198 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
MYCNP04198 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
MYCNP04198 LRRC37A4P-202ENST00000581296 5372 ntBASIC10.71□□□□□ -0.69
MYCNP04198 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC10.71□□□□□ -0.69
MYCNP04198 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
MYCNP04198 ZNF321P-201ENST00000313956 2341 ntTSL 2 BASIC10.71□□□□□ -0.69
MYCNP04198 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
MYCNP04198 RN7SKP95-201ENST00000362860 303 ntBASIC10.71□□□□□ -0.69
MYCNP04198 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
MYCNP04198 GJA6P-201ENST00000415117 1042 ntBASIC10.71□□□□□ -0.69
MYCNP04198 RPS15AP30-201ENST00000420976 390 ntBASIC10.71□□□□□ -0.69
MYCNP04198 AC012065.2-201ENST00000421295 375 ntBASIC10.71□□□□□ -0.69
MYCNP04198 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
MYCNP04198 IFT122-205ENST00000431818 4414 ntTSL 2 BASIC10.71□□□□□ -0.69
MYCNP04198 AC011816.1-201ENST00000441346 546 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms