Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 AC063977.5-201ENST00000601044 974 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 AL137246.2-201ENST00000613439 662 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 CASC19-264ENST00000641912 1184 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.97□□□□□ -1.29
COL1A1P02452 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 AC025470.1-201ENST00000510053 2032 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
COL1A1P02452 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 AL662795.2-201ENST00000624252 3706 ntBASIC6.96□□□□□ -1.29
COL1A1P02452 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL1A1P02452 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.96□□□□□ -1.29
COL1A1P02452 AC114786.1-201ENST00000512892 1415 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 AC068733.2-201ENST00000605434 1418 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
COL1A1P02452 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 AL360271.1-201ENST00000395679 510 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.96□□□□□ -1.3
COL1A1P02452 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.96□□□□□ -1.3
COL1A1P02452 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 RANP1-206ENST00000455094 651 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 RN7SL329P-201ENST00000467740 299 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 RPL35AP19-201ENST00000469425 329 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 AC100832.1-201ENST00000471945 383 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 OR2AO1P-201ENST00000476497 403 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 RN7SL826P-201ENST00000479724 288 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 AC099521.1-201ENST00000482557 334 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 AC093270.2-201ENST00000486157 792 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 RN7SL547P-201ENST00000490793 290 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 AC093763.2-201ENST00000505334 1223 ntBASIC6.96□□□□□ -1.3
COL1A1P02452 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.96□□□□□ -1.3
COL1A1P02452 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.96□□□□□ -1.3
COL1A1P02452 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.96□□□□□ -1.3
COL1A1P02452 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.96□□□□□ -1.3
COL1A1P02452 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.96□□□□□ -1.3
COL1A1P02452 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.96□□□□□ -1.3
COL1A1P02452 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.96□□□□□ -1.3
COL1A1P02452 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL1A1P02452 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.96□□□□□ -1.3
COL1A1P02452 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.95□□□□□ -1.3
COL1A1P02452 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 NIFKP3-201ENST00000417799 865 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 RPS17P17-201ENST00000419392 409 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.95□□□□□ -1.3
COL1A1P02452 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.95□□□□□ -1.3
COL1A1P02452 AC006335.2-201ENST00000437993 330 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 CNOT7P2-201ENST00000441051 832 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 AC005297.1-201ENST00000444765 862 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.95□□□□□ -1.3
COL1A1P02452 SLC25A51P1-201ENST00000468432 871 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.95□□□□□ -1.3
COL1A1P02452 TOMM22P4-201ENST00000511318 336 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 HAUS8P1-201ENST00000549005 542 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 DPPA3P2-202ENST00000557188 1219 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.95□□□□□ -1.3
COL1A1P02452 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 PPATP2-201ENST00000605635 508 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL1A1P02452 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
COL1A1P02452 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.95□□□□□ -1.3
COL1A1P02452 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COL1A1P02452 AL117378.2-201ENST00000622916 1337 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 AC073429.2-201ENST00000569694 1444 ntBASIC6.95□□□□□ -1.3
COL1A1P02452 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL1A1P02452 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 AL592429.1-201ENST00000403909 1473 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.94□□□□□ -1.3
COL1A1P02452 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL1A1P02452 AC006455.6-201ENST00000426192 893 ntBASIC6.94□□□□□ -1.3
COL1A1P02452 NIPA2P1-201ENST00000426223 976 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms