Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.79□□□□□ -1
RAPGEF3O95398 SEC63P1-201ENST00000425785 1258 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.79□□□□□ -1
RAPGEF3O95398 AC006466.1-201ENST00000438721 289 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.79□□□□□ -1
RAPGEF3O95398 RPL23AP60-201ENST00000450011 454 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 DNAJB5P1-201ENST00000454004 806 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 RAB28P2-201ENST00000454299 641 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 RN7SL51P-201ENST00000468230 285 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 HESX1-202ENST00000473921 757 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.79□□□□□ -1
RAPGEF3O95398 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC8.79□□□□□ -1
RAPGEF3O95398 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.79□□□□□ -1
RAPGEF3O95398 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC8.79□□□□□ -1
RAPGEF3O95398 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.79□□□□□ -1
RAPGEF3O95398 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 MIR4260-201ENST00000583107 67 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 AC245128.3-201ENST00000594721 748 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 AC106730.3-201ENST00000624568 641 ntBASIC8.79□□□□□ -1
RAPGEF3O95398 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.79□□□□□ -1
RAPGEF3O95398 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RAPGEF3O95398 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.79□□□□□ -1
RAPGEF3O95398 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.79□□□□□ -1
RAPGEF3O95398 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.78□□□□□ -1
RAPGEF3O95398 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 LINC01963-201ENST00000562038 3148 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 OR5T3-201ENST00000303059 1023 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AC005294.1-201ENST00000355509 281 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 CYB5AP4-201ENST00000396692 399 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC8.78□□□□□ -1
RAPGEF3O95398 TRIM60P13-201ENST00000432350 1283 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 SDR42E1P3-201ENST00000438345 502 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AL136455.1-201ENST00000441083 1240 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AC006463.2-201ENST00000473326 348 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AC087672.1-201ENST00000479876 766 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.78□□□□□ -1
RAPGEF3O95398 AC147055.1-201ENST00000509261 750 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AP001922.4-201ENST00000526967 290 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 AC067805.1-201ENST00000559344 470 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AC011840.5-201ENST00000582125 771 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC8.78□□□□□ -1
RAPGEF3O95398 MIR4697-201ENST00000582977 78 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AC015849.6-201ENST00000605454 474 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 FAM25E-202ENST00000608562 189 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 AP002505.2-201ENST00000623585 696 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
RAPGEF3O95398 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 FBXL21-201ENST00000297158 1305 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
RAPGEF3O95398 AC087516.1-201ENST00000561236 2428 ntBASIC8.78□□□□□ -1
RAPGEF3O95398 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RAPGEF3O95398 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.77□□□□□ -1
RAPGEF3O95398 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.77□□□□□ -1
RAPGEF3O95398 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.77□□□□□ -1
RAPGEF3O95398 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
RAPGEF3O95398 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms